Gene BBta_4077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4077 
Symbol 
ID5150379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4275679 
End bp4277106 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content65% 
IMG OID640558910 
Product4-hydroxybenzoate transporter 
Protein accessionYP_001240049 
Protein GI148255464 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0892005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.387821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGAC GGGCGGGACG GTTGCAACAA CAACGCAAAA CGGGGGAGGA ACACTTGACG 
CAAGGGATCA ATCTCACGCG CTACGTCGAC GAACGACCGC TGTCGGCATT TCAGATTCGT
GTCGTCTGCC TGTGCGCGCT CGTGGTCGGG CTCGACGGCT TCGATGCCCA GGCGCTCGGC
TTCGTCGCGC CCGCGCTCAG CAAGGACCTG CATCTCGCGC CGGGCGCGCT CGGTCCGGTG
TTTGGCGCAT CCCTGTTCGG CGTGATGATC GGCTCCTTGG TGTTCGGCGC CCTCGCCGAC
TATCTCGGGC GCAAATGGCT GGTGATCGCC GGCGTTCTCG TCTTCGCGCT CGGCTCGCTG
GCGACGACCC AGGCGACCAG CGTGTCCGAC CTCGTCATGA TCAGGTTCGT CACCGGCATC
GGGCTCGGCG GCGTCCTGCC CAATACGATC GCCCTGACCG GCGAGTATTC GCCGCAGCGT
CGCCGGACCC TGTTGATCAT GCTGATGTTC ATGACGGTGT CGCTGGGGTC GGCGATCGGC
GGCGCGGTGG CGGCCCGGCT CATCACCGCC TATGGCTGGC AGGTCATCTT CCTGATCGGC
GGCGCTCTGC CACTCATTCT TTGTCCGATC CTGATCATCT GGCTTCCGGA ATCGTTGTCG
CTGCTCGCGC TCGACACCAG CAAGAGCGAT CGCGTGCGCA CCTTGCTGAT GCGCATCGAT
CCGTCGGCAA TGCTCCCCGC CGATGCGCGT TTCACAATCG TCGAAGAGAG CGGCAAGGGT
TTTCTCCTGC CGCAGCTGTT CACCAAGCGG CGGCTGCTGC CGACCCTGCT GCTCTGGATC
ATGTTCTTCA TGAACATGAT GGACATCTAT TTCCTCAACA GCTGGCTGCC GACGTTGACG
CATGGTGTCG GGCTCGACGT CCAGGCGGCG ATCGCCGTCG GCATCGCGTT CCAGCTCGGT
GGGATGCTGG GCACGATCGG ACTCGGCCTG CTGATCGAAC GGTTCGGCTT CGATCGCGTG
CTGTTCGCGA CCTACGTCGC GGGCTTCCTC TCGATCGTCA CCATTGGCAT CGCGGGCGCA
TCATTGCCGA TCCTCGTGCC AGCCGTCTTC ATCGCCGGCG TGGCGGTGAT CGGCGGACAG
ATCGGCTGCA ACGCCTATGC CGCGCGCATC TACCCCACCT ACATCCGCGG CACCGGCATC
GGCTGGGCGC TGGGCATCGG CCGCTTTGGC TCCATCCTCG GCGTCACCCT GGGCGGCTTG
ATGCTCGCCG CGCATTGGGA TGTTGCCGCG CTGTTCCAGG CCAGCGCGGT GCCGCAGCTG
TGTTCGGCGC TGGTGATCCT CGGCCTCGCC CTTCTCGGCA TGCGCGGCCG TCTTCCATCC
TCCGACGACG CGCAACCGGG TGTGCTCTCC ACACCTGAGC GGGCCTAG
 
Protein sequence
MPRRAGRLQQ QRKTGEEHLT QGINLTRYVD ERPLSAFQIR VVCLCALVVG LDGFDAQALG 
FVAPALSKDL HLAPGALGPV FGASLFGVMI GSLVFGALAD YLGRKWLVIA GVLVFALGSL
ATTQATSVSD LVMIRFVTGI GLGGVLPNTI ALTGEYSPQR RRTLLIMLMF MTVSLGSAIG
GAVAARLITA YGWQVIFLIG GALPLILCPI LIIWLPESLS LLALDTSKSD RVRTLLMRID
PSAMLPADAR FTIVEESGKG FLLPQLFTKR RLLPTLLLWI MFFMNMMDIY FLNSWLPTLT
HGVGLDVQAA IAVGIAFQLG GMLGTIGLGL LIERFGFDRV LFATYVAGFL SIVTIGIAGA
SLPILVPAVF IAGVAVIGGQ IGCNAYAARI YPTYIRGTGI GWALGIGRFG SILGVTLGGL
MLAAHWDVAA LFQASAVPQL CSALVILGLA LLGMRGRLPS SDDAQPGVLS TPERA