| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4073 |
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| Symbol | hfq |
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| ID | 5154278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4270547 |
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| End bp | 4270795 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640558906 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_001240045 |
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| Protein GI | 148255460 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.613894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCAG ACCGCGCACA GAACCTTCAA GACACCTTTC TCAACCATGT TCGCAAAACC
AAGACGCCGC TCACGATCTT CCTGGTCAAT GGCGTGAAAC TGCAGGGGAT TGTCACATGG
TTCGACAATT TCTGCCTGCT GCTCCGGCGC GACGGTCACT CGCAGCTCGT GTACAAGCAT
GCGATCTCCA CCATCATGCC CGGCGCGCCG ATCCAGCTGT TCGAGGGCGG CGAGGACGCT
TCTGCGTGA
|
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| Protein sequence | MAADRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH
AISTIMPGAP IQLFEGGEDA SA
|
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