| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4072 |
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| Symbol | ntrX |
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| ID | 5154277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4268905 |
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| End bp | 4270275 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558905 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001240044 |
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| Protein GI | 148255459 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.4137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTG ATATTCTGAT TGTCGACGAT GAAGCCGATA TCCGGGAGCT GGTAGCCGGC
ATCCTGGATG ACGAGGGCTT CACGACGCGA ACCGCTCGCG ACAGCGATTC GGCACTGGCC
GAGATCGCCG GCCGCCGACC CAACCTCGTG TTTCTCGACA TCTGGCTGCA GGGCTCCAAG
CTCGACGGCC TGCAGCTGCT GGAGCAGATC AAGAAGGATC ATCCGGACCT GCCGGTCGTG
ATGATCTCGG GTCACGGCAA CATCGAGACC GCAGTCGCCG CGATCAAGCG CGGCGCCTAT
GACTTCATCG AGAAGCCGTT CAAGTCCGAC CGCCTGATCC TGGTCGCGAC ACGCGCGCTG
GAGACGTCGC GGCTCAAGCG CGAGGTGCGC GAGCTGAAGC AGCTGGCACC GACCGCGAGC
ACGATGACCG GCCGCTCGCC GTCGATGAAC CAATTGCGCC AGACCATCGA GCGCGCCGCC
AAGGCCAACA GCCGCATTCT GATCGTCGGT CCGCCCGGCT CCGGCAAGGA GCTCGCCGCG
CGCACGCTGC ATGCCCAATC GCCGCGCGCC GAGGGACCCT TCGTGGTCAT CAACGCTGCG
GCGATCACGC CGGAGCGGAT GGAGGAGGAG CTGTTCGGCG TCGAGCAGTC CAACGGCGAG
CAGTCACGCA AGACTGGCGC GCTCGAAGAA GCCCATGGCG GCACGCTGTT CGTCGACGAA
ATCGCCGACA TGCCGCGGGA GACGCAGAAC AAGATCTTGC GCGTGTTGGT CGACCAGACC
TTCCAGCGTG CGGGCGGCAC CACCAAAGTG CACGTCGATG TGCGCATCAT CTCGTCGACC
GCGCGCAATC TCGAGGAGGA GATCGCCGCC GGCCGCTTCC GCGAGGACCT CTATCACCGC
CTGTCCGTGG TCCCGATCCG CGTCCCGCCA CTGTCCGAGC GGCGCGAGGA CATTCCCGAG
CTGATCGACT ATTTCATGGA CCAGATTTCG GTCACGACCG GACTGCCGAA GCGGCAGATC
GGCCAGGATG CGATGGCGGT GCTGCAGTCG CATGTCTGGC CTGGCAATGT CCGCCAGCTC
CGCAACAATG TCGAGCGCGT GATGATTCTC GCGGCCGGCG GGCCCGAGGT GATCATCACC
GCCGACATGC TGCCGCCGGA TGTGGGGTCG ATGGTGCCGG CCATGCCCAC CAGCAACAAT
GGCGAGCACA TTATGGGCCT TCCACTGCGT GAGGCGCGCG AAGTGTTCGA GCGCGACTAT
CTGATTGCGC AGATCAGCCG GTTCTCCGGC AACATCTCGC GCACTGCCGA GTTCGTGGGC
ATGGAGCGAT CAGCGCTGCA TCGCAAGCTC AAGGCCCTTG GGGTGGGCTG A
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| Protein sequence | MASDILIVDD EADIRELVAG ILDDEGFTTR TARDSDSALA EIAGRRPNLV FLDIWLQGSK
LDGLQLLEQI KKDHPDLPVV MISGHGNIET AVAAIKRGAY DFIEKPFKSD RLILVATRAL
ETSRLKREVR ELKQLAPTAS TMTGRSPSMN QLRQTIERAA KANSRILIVG PPGSGKELAA
RTLHAQSPRA EGPFVVINAA AITPERMEEE LFGVEQSNGE QSRKTGALEE AHGGTLFVDE
IADMPRETQN KILRVLVDQT FQRAGGTTKV HVDVRIISST ARNLEEEIAA GRFREDLYHR
LSVVPIRVPP LSERREDIPE LIDYFMDQIS VTTGLPKRQI GQDAMAVLQS HVWPGNVRQL
RNNVERVMIL AAGGPEVIIT ADMLPPDVGS MVPAMPTSNN GEHIMGLPLR EAREVFERDY
LIAQISRFSG NISRTAEFVG MERSALHRKL KALGVG
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