| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4071 |
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| Symbol | ntrY |
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| ID | 5154348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4266534 |
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| End bp | 4268888 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558904 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001240043 |
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| Protein GI | 148255458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.714466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CAGACACCTC GGCCACCCCT TTCGATGCCT CGCCCCCTGA GGGGCGGCGC
TGGACCTGGC GCACCTGGCT GGCGCCGGTG GCGGTGGCTG TCGCGCTGTC CTCAGGCTTC
CTCACCTTCA TCGTGCTGGT GGGCTTGAGC CCGATCGAGC CGACGACCGA GGTGGTCAAA
ACCTTCTATC TGATCGATGC CGGCACGATC CTGATCCTGG TCGGCATCAT CATCCGTGAG
GTCTGGCAGG TCGTGCAGGC CCGCCGACGG GGCCGGGCGG CAGCGCGGCT GCACGTCCAG
ATCGTCAGCC TGTTCTCCGT CATCGCCGTG CTGCCGGCGG TGCTGGTCGC CGTCGTCGCC
AACGTCACCA TCGACCGCGG CCTGGATCGG CTGTTTTCCG GGCCGGCCAA GGTCGCGATC
CAGAATTCGC TGACCATCGC CCGCGCCTAT ATGCAGGAGC ATGCGCAGTT CATCCGCGGC
GACATTCTCG GCATGGCCAA TGACATCGCC CGGGCCCGGC CGCTGTTCGA CCAGGACCGC
GCCAGTTTCC GCGAGCTGCT GACCGCCAGC GCCGCCTCGC GCAACCTGCC GGGCGCGATG
ATCATCGACA AGAACACCAA CCCGATCGTG TGGGCGGAGA CCGGCGGTGT GCAGCTGGCT
TATTCGCCGC CGGCGCCCGA ATTCCTGAAC AATGTCGGCG AGCAGGAGCC GGAGATCGCG
GTTCTGCCGG AGTCCAACTA CGTCGCAGCG GTGATCAGGC TGCGCGCCTT CAACGATACC
TTCCTCTATG TCGCGCGCCC GCTCGATCCG CAGGTCGTCG ACCAGCTCAA ACAGACCGAG
CTGTCGGTCG CCGAATATGC CCAGGTCGAG GCGCGGCGGT TCGGCATCCA GGTCGCCTTC
GCATTGATGT TCGCGGTGAT CGCGCTGACC ATTCTGATGG CCTCGGTGCT GATCGGCCTG
AACTTCGCCA ATTGGCTGGT CGCCCCGATT CGCCAGCTGA TGAATGCCGC GCATGTGATC
TCGACCGGCG ATCTCAACGT CCAGGTTCCC GTGCACCGCT CGGAAGGCGA TCTCGCCCAG
CTCGGCCAGA CCTTCAACAA GATGACGCAG GAGCTGCGCA CGCAGCGCGA CGAACTGGTC
AGCGCCAGCG AGCTGATCGA CAGCCGGCGC CGCTTCATCG AGGCGGTGCT GTCGTCGGCC
TCGGCCGGCA TCATCGGCGT CGATGCCTCG GGCAGTGTCG GCATCCTCAA CCGCTCGGCC
GAGAAGCTGA TCGGACATGC GGAGCAGGAG GTGCTCGATC ATCCGCTGTC GGAGGTGCTG
CCCGAGCTCG ACGACATGAT GAAGACCGCG CGCGAGGGCA AGCAGCGCCT GGTGCAGGGG
CAGATCACCA TCCAGCGGGA CGGCCATGAG CGGAACCTGT CGGTGCGTGT CACCGCCGAG
CAGACCAATC AGGCCCGCGA CAGCTATATC ATCACGCTCG ACGACATCAC CGAACTCGTC
TCGGCGCAGC GCACGTCCGC CTGGGGCGAC GTCGCGCGGC GCATCGCCCA TGAGATCAAG
AATCCGCTCA CGCCAATTCA GCTTTCCGCA GAACGGATTC GCCGCAAATT CGGCAAGGTC
ATCACCGAGG ACAAGGCCGT ATTCGAGCAG TGCACCGAGA CGATCGTGCG GCAGGTCGAC
GACATCAGGC GAATGGTCGA TGAGTTCTCG CGTTTCGCCC GGATGCCGAA GCCGGTGATG
GAGGGCGAGG ACGTCGCCGA CACGGTGCGC CAGGCCGTCT TCCTGATGAA GGTCGCGCAT
CCCGAGATCG ATATCGAGAC CGAGATCAAG CAGGACCCGC TGCGCGCGCA ATTCGATCGG
CGCCTGATCT CGCAGGCTCT GACCAACATC ATCAAGAACG CGACCGAGGC GATCGAGGTG
GTGCCGGAAG AGGAGCTGGG CAAGGGCCGC ATCGACGTCG TCGCGTCGCG CGAGGGCGAC
GATGTGACGA TCGACGTGAT CGACAACGGC ATCGGCCTGC CGAAAGTGGC ACGGCAGCGT
TTGCTCGAGC CCTATGTCAC GACACGGGCA AAGGGCACCG GCCTCGGCCT CGCGATCGTC
GGTCGTGTGT TGGAGGATCA CGGCGGCCGG CTGGAGCTGA AGGACGCCGC CGATTTCCGT
CCTGGCCAGC GCGGCGCGTG GATGCGGCTG CGCTTTGCCG TGTCGGGACA GGCCGCCAAG
GCGGGTGCCA AGGAGCAGCC CGCTGCAATC GCCGCAACCG ACGGCGCACC AACAAATGAG
TCCGCGGGGG AAACCGCGGG CCCGGTTGAA ACGACCAATA GCGAACCAAA AATCCAGGCC
GCAACACGCG GCTGA
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| Protein sequence | MTSADTSATP FDASPPEGRR WTWRTWLAPV AVAVALSSGF LTFIVLVGLS PIEPTTEVVK
TFYLIDAGTI LILVGIIIRE VWQVVQARRR GRAAARLHVQ IVSLFSVIAV LPAVLVAVVA
NVTIDRGLDR LFSGPAKVAI QNSLTIARAY MQEHAQFIRG DILGMANDIA RARPLFDQDR
ASFRELLTAS AASRNLPGAM IIDKNTNPIV WAETGGVQLA YSPPAPEFLN NVGEQEPEIA
VLPESNYVAA VIRLRAFNDT FLYVARPLDP QVVDQLKQTE LSVAEYAQVE ARRFGIQVAF
ALMFAVIALT ILMASVLIGL NFANWLVAPI RQLMNAAHVI STGDLNVQVP VHRSEGDLAQ
LGQTFNKMTQ ELRTQRDELV SASELIDSRR RFIEAVLSSA SAGIIGVDAS GSVGILNRSA
EKLIGHAEQE VLDHPLSEVL PELDDMMKTA REGKQRLVQG QITIQRDGHE RNLSVRVTAE
QTNQARDSYI ITLDDITELV SAQRTSAWGD VARRIAHEIK NPLTPIQLSA ERIRRKFGKV
ITEDKAVFEQ CTETIVRQVD DIRRMVDEFS RFARMPKPVM EGEDVADTVR QAVFLMKVAH
PEIDIETEIK QDPLRAQFDR RLISQALTNI IKNATEAIEV VPEEELGKGR IDVVASREGD
DVTIDVIDNG IGLPKVARQR LLEPYVTTRA KGTGLGLAIV GRVLEDHGGR LELKDAADFR
PGQRGAWMRL RFAVSGQAAK AGAKEQPAAI AATDGAPTNE SAGETAGPVE TTNSEPKIQA
ATRG
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