| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4070 |
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| Symbol | ntrC |
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| ID | 5154347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4264921 |
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| End bp | 4266363 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558903 |
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| Product | nitrogen metabolism transcriptional regulator NtrC |
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| Protein accession | YP_001240042 |
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| Protein GI | 148255457 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.131979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.446618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAG GTAGCATTCT CGTTGCCGAC GACGATACGG CCATCCGCAC GGTCCTGAAC
CAGGCGCTGT CACGCGCCGG CTATGAGGTG CGGCTGACCG GCAATGCCGC CACCCTGTGG
CGCTGGGTGA GTCAGGGCGA GGGCGATCTC GTCATCACCG ACGTGGTGAT GCCGGACGAG
AACGCGTTCG ACCTGCTGCC GCGGATCAAG AAGATGCGGC CCAACCTGCC GGTCATCGTC
ATGAGCGCGC AGAACACCTT CATGACCGCG ATCCGGGCCT CGGAGCGTGG CGCCTATGAA
TATCTGCCGA AGCCGTTCGA CCTGAAGGAG CTGATCGCGA TCGTCGGCCG CGCCTTGGCG
GAGCCGAAGG AGCGGGCGGC GAGCCAACCC GACGACAACG AGTTCGAATC GATCCCGCTG
GTCGGCCGCT CGCCGGCGAT GCAGGAAATC TACCGCGTGC TGGCGCGTCT GATGCAGACC
GACCTCACCG TGATGATCTC GGGCGAGAGC GGCACCGGCA AGGAGCTGGT GGCGCGCGCG
CTGCACGACT ACGGCAAGCG CCGCAACGGC CCGTTCGTCG CGGTCAACAT GGCGGCGATC
CCGCGCGACC TGATCGAATC CGAGCTGTTC GGCCATGAAC GCGGCGCCTT CACCGGCGCC
AACACGAGAG CCTCCGGGCG CTTCGAGCAG GCCGAGGGCG GCACCCTGTT CCTGGACGAG
ATCGGCGACA TGCCGATGGA GGCGCAGACG CGGCTTCTGC GCGTGCTGCA GCAGGGCGAA
TACACCACCG TGGGCGGCCG CACCCCGATC AAGACCGATG TGCGCATCGT CGCGGCCTCC
AACAAGGACC TGCGCATCCT GATCCAGCAG GGGCTGTTCC GCGAGGACCT GTTCTTCCGC
CTCAACGTCG TACCGCTGCG GCTGCCGCCG TTGCGCGAGC GCATCGAGGA CCTGCCGGAC
TTGGTCCGGC ACTTCTTCGC GCTCGCCGAG AAGGACGGGC TGCCGCCCAA GAAGCTCGAC
GCCGCCGCGC TCGAGCGGCT CAAGCAGCAC CGTTGGCCGG GCAATGTCCG CGAACTGGAA
AATCTCGCCC GCCGCCTCGC CGCGCTGTAT CCGCAAGACG TCATCACGGC CTCGGTGATC
GATGGCGAGC TGGCGCCGCC CGCGGTCACG ACCGGGTCCA GCACGCCGAC CTCGATCGAC
AATCTCGGCG GCGCCGTGGA GGCCTATCTG TCCTCGCACT TCCAGGGCTT CCCGAATGGC
GTGCCGCCGC CGGGCCTGTA TCACCGCATT CTCAAGGAGA TCGAGATCCC GCTGCTCACG
GCCGCCCTGG CGGCCACCCG CGGCAATCAG ATCCGCGCGG CCGATCTGCT TGGCCTGAAC
CGCAATACGC TGCGCAAGAA GATTCGCGAC CTCGATATCC AGGTCTACCG CAGTGGCGGC
TAG
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| Protein sequence | MPAGSILVAD DDTAIRTVLN QALSRAGYEV RLTGNAATLW RWVSQGEGDL VITDVVMPDE
NAFDLLPRIK KMRPNLPVIV MSAQNTFMTA IRASERGAYE YLPKPFDLKE LIAIVGRALA
EPKERAASQP DDNEFESIPL VGRSPAMQEI YRVLARLMQT DLTVMISGES GTGKELVARA
LHDYGKRRNG PFVAVNMAAI PRDLIESELF GHERGAFTGA NTRASGRFEQ AEGGTLFLDE
IGDMPMEAQT RLLRVLQQGE YTTVGGRTPI KTDVRIVAAS NKDLRILIQQ GLFREDLFFR
LNVVPLRLPP LRERIEDLPD LVRHFFALAE KDGLPPKKLD AAALERLKQH RWPGNVRELE
NLARRLAALY PQDVITASVI DGELAPPAVT TGSSTPTSID NLGGAVEAYL SSHFQGFPNG
VPPPGLYHRI LKEIEIPLLT AALAATRGNQ IRAADLLGLN RNTLRKKIRD LDIQVYRSGG
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