| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4067 |
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| Symbol | ispDF |
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| ID | 5153386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4261124 |
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| End bp | 4262305 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558900 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001240039 |
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| Protein GI | 148255454 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.438057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT CTCAGCGGAC TGCAGCCATT CTCGTCGCGG CCGGACGCGG CCTGCGCGCC
GGCACCGGCG GTCCGAAGCA ATATCGCGCG ATCGGCGGCC GCACCGTCAT CCACCGCGCG
CTCGCCGCCT TTTCGGAGCA TCCTGACGTC GCCGTCGTGC AGCCGGTGGT GAACCCCGAT
GACATCGACG TCTTCAATGC CGCGGTCAGT GGCCTGCGCC ACGAGGTGCC CGCGCATGGC
GGCGCGACAC GGCAGGCGTC AGTGCTCGCA GGCCTGGAAG CGCTGGTGCC GCACCGACCG
GACATCGTGC TGATCCACGA CGCCGCGCGC CCGTTCGTGA CATCGGCCGT GATCTCGCGC
GCGATCCAAG CGGCCGGCAA GACCGGCGCG GCCATTCCCG TCGTGCCCGT CACCGACACG
ATCAAGGAGG TCACGGCGAG CGGCGACATC ATCGCGACAC CGGAGCGCGC GAAGCTGCGC
ATCGCGCAGA CGCCGCAGAC CTTCAAATTC GAGGTCATCC TGGAGGCGCA TCGGCGCGCC
GCGCGCGACG GCCTCACCGA GTTCACAGAT GATGCGGCGA TCGCCGAATG GGCGGGATTG
ACCGTCGCGA CGTTTGAGGG CGATGTTGCC AATATGAAGC TCACCACACC CGAAGATTTC
GTGCGCGAGG AAGCGCGGCT CGCCGCTCAG CTCGGCGACA TCAGGACCGG CACCGGCTAC
GACGTGCATG CCTTCGGCGA GGGCGACCAT GTCTGGCTGT GCGGCCTGCG CGTGCCGCAT
AGCAAGGGCT TCCTGGCCCA CTCCGACGGC GACGTCGGAT TGCACGCCCT GGTTGACGCA
ATTTTGGGCG CCCTGGCCGA TGGTGACATC GGCTCGCATT TCCCGCCCTC GGACATGAAG
TGGAAGGGCG CCTCGTCCGA TCAGTTCCTG AAATACGCGA TCGAGCGGGT CACGGCGCGC
GGCGGACGGG TGGCCAATCT CGAGGTGACG ATGATCTGCG AACGGCCGAA GATCGGTCCC
CTGCGCGACC AGATGCGCGC ACGCATCGCC GAGATTTCGG GAGTCGATAT CTCGCGCATC
GCGGTGAAAG CCACCACCAG CGAGCGCCTC GGCTTCACCG GCCGCGAGGA AGGCATCGCC
GCGACCGCAA GTGCGACGAT CCGGCTGCCG TGGAGCGCAT GA
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| Protein sequence | MTISQRTAAI LVAAGRGLRA GTGGPKQYRA IGGRTVIHRA LAAFSEHPDV AVVQPVVNPD
DIDVFNAAVS GLRHEVPAHG GATRQASVLA GLEALVPHRP DIVLIHDAAR PFVTSAVISR
AIQAAGKTGA AIPVVPVTDT IKEVTASGDI IATPERAKLR IAQTPQTFKF EVILEAHRRA
ARDGLTEFTD DAAIAEWAGL TVATFEGDVA NMKLTTPEDF VREEARLAAQ LGDIRTGTGY
DVHAFGEGDH VWLCGLRVPH SKGFLAHSDG DVGLHALVDA ILGALADGDI GSHFPPSDMK
WKGASSDQFL KYAIERVTAR GGRVANLEVT MICERPKIGP LRDQMRARIA EISGVDISRI
AVKATTSERL GFTGREEGIA ATASATIRLP WSA
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