Gene BBta_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4066 
Symbol 
ID5153385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4260159 
End bp4260770 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID640558899 
Producthypothetical protein 
Protein accessionYP_001240038 
Protein GI148255453 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.465317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG AACGTCAAAT CGGCTCCACC AGCGCGCTGG CCCGCTCGCT GCTCGACCTC 
TGCCGGTCGC GCAAGCTGAT GATCGCCACC GCCGAATCCT GCACCGGCGG CCTCGTCGCC
GGCGCGCTGA CCGAGATCCC CGGCTCCTCC GACGTCATCG ACCGCGGCTT CGTCACCTAT
TCCAACGAGG CCAAGCGCGC GATGCTCGGC GTCGAAGCCT CGACGCTGCA GACCTTCGGC
GCGGTGTCCA AGGAGACCGC GATCCAGATG GCGGTCGGCG CGCTGGAGCG GGCCGATGTC
GACCTCGCAG TCGCCATCAC CGGCATCGCC GGCCCCGGCG GCGCCACCCC CGGCAAGCCG
GTCGGCCTGG TCCATTTCGC CGTCGCCGCC CGCGACGGCC GTATCACCCA CCGCGAGCAC
CGCTTCGGCG CCATCGGCCG CAGCGCTGTG CGCACGCGCT CGGTCCTCGA GGCCCTGCGC
CTGCTGATGG AGCTGGCGCG GCCGCAAGGA GCCGTGAAGC CGAAGCGCGC CGCCGCGACG
CGGCTGCGCC CGCGCGTCGC GCGGGCGCCC CGGCTGCATC CGGTGAAGCG CCCGAGGCGA
CCGCAGACGT AA
 
Protein sequence
MASERQIGST SALARSLLDL CRSRKLMIAT AESCTGGLVA GALTEIPGSS DVIDRGFVTY 
SNEAKRAMLG VEASTLQTFG AVSKETAIQM AVGALERADV DLAVAITGIA GPGGATPGKP
VGLVHFAVAA RDGRITHREH RFGAIGRSAV RTRSVLEALR LLMELARPQG AVKPKRAAAT
RLRPRVARAP RLHPVKRPRR PQT