Gene BBta_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4062 
Symbol 
ID5154001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4257855 
End bp4258412 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID640558895 
Producthypothetical protein 
Protein accessionYP_001240034 
Protein GI148255449 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.247247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCT CCTCTCTTTA TGATGAAGCG CTGGTCTATG CGGCGGACCT GCACCGGAGC 
CAGGTGCGAA AGGGCAGTCG GGTGCCCTAT ATCGCGCATC TGCTCAGCGT CTCCAGTCGC
GTGCTGACGG CGGGCGGCAA CGAGGTGCAG GCCATCGCCG GACTGCTGCA CGACGCCGCC
GAGGATCAGG GCGGACAGGC CACGCTGGAC GAGATCCGCC GGCGGTTCGG CGACGGCGTT
GCCGAGATCG TGGCGGACTG CACGGATTCC TGGGTCGAAC CGAAGCCGGC ATGGCGGGCC
CGCAAGGACG CCTACCTTGC CAAGCTGCCG CACAAGCCAG TAACGTCGCT GCTGGTCTCG
CTCGCCGACA AGGTCGACAA TGCGGAGGCG ATCGCGAAGG ACTATGATGA GATCGGCGAT
GCGGTGTGGC AGCGCTTCAG CGGCGGACGG GACGGCACGA TCTGGTACTA CCGCACGCTG
AGCCTCATCT TCGATCAGAC ATTGCCCGGG CCGTTGGCGC GGCAGCTCGC ACGAACTGTT
GGGACCTTTC CGTCCTGA
 
Protein sequence
MSLSSLYDEA LVYAADLHRS QVRKGSRVPY IAHLLSVSSR VLTAGGNEVQ AIAGLLHDAA 
EDQGGQATLD EIRRRFGDGV AEIVADCTDS WVEPKPAWRA RKDAYLAKLP HKPVTSLLVS
LADKVDNAEA IAKDYDEIGD AVWQRFSGGR DGTIWYYRTL SLIFDQTLPG PLARQLARTV
GTFPS