| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4052 |
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| Symbol | |
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| ID | 5149012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4251721 |
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| End bp | 4252743 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558885 |
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| Product | putative TRAP-type C4-dicarboxylate transport system |
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| Protein accession | YP_001240024 |
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| Protein GI | 148255439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.440792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.274603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAC GCCGCACTGT CCTCGCGTCC GCGCTCGCTG CGCCCGCCAT TCTGCGTTTT
GGAACCGGAA CCGCTCGGGC GGCGACCACG CTGAAGATCT CCCATCAGTT CCCGGGGGGA
ACCATCGACA AGGGCGACTT CCGCGACCGG CTCTGCCGGA TGTTCGCCGA GGAAGTGTCG
AAGCGCTCTG GCGGCGAGAT CGCGGCCGAG ATCTATCCGA ACTCGTCGCT GATCAAGACC
GTTGCGCAGT TCTCGGCGAT GCGGAAGGGC GCGCTCGACA TCAGCCTCTA TCCGATGCCC
TATGCCGGCG GCGAGGTTCC CGAGACCAAT ATCGGACTGA TGCCGGGCCT CGTCACCACG
TACGATCAGG GCCTGCGCTG GAAGAACGAG CCAGTCGGCA AGGCGCTCAG CGACTTCCTC
GCCGACAAGG GCATCATCCT GCTGACCTGG GTCTGGCAGG CCGGCGGCGT CGCCAGCCGC
TCGCGGCCGC TGGTCACCCC CGACGACGCC AAGGGCATGA AGGTGCGCGG CGGCTCGCGC
GAGATGGACA TGGTGCTGCA GACCGCCGGT GCGTCGGTGC TGTCGGTGCC GTCGAACGAG
ATCTACACGG CGATGCAGAC CGGGGCCTGC GATGCCGGCC TGACCTCCTC GACCAGCCTG
ATCTCGTTCC GCCTCGAAGA GGTCGCGAAG GCTCTGACCT CCGGCGCCAA GGCGTCCTAT
TGGTTCATGC TCGAGCCACT GATGATGTCG AAGGCGACGT TCGACAAGCT GCCGAAGAAC
CAGCAGGACG TCCTGCTCGC CGTCGGCGCC GAGCTCGAGG CCTTCGGGCG CAAGGGCGCG
CAGGACGACG ACATCGAGGT CGCCAAGGTC TATGAAAAGG CCGGCGCCAA GGTGGCCGAG
CTCGACCTCG AGACCGTCAA CAAGTGGCGC GACATTGCCC GTGATACCGC CTGGAAGGAC
TATGGCGGGA AGTCCGCGAA CTGCGCCAAG CTCCTGAAGC TCGCCTCCGA CGTGGCGGCC
TGA
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| Protein sequence | MLSRRTVLAS ALAAPAILRF GTGTARAATT LKISHQFPGG TIDKGDFRDR LCRMFAEEVS
KRSGGEIAAE IYPNSSLIKT VAQFSAMRKG ALDISLYPMP YAGGEVPETN IGLMPGLVTT
YDQGLRWKNE PVGKALSDFL ADKGIILLTW VWQAGGVASR SRPLVTPDDA KGMKVRGGSR
EMDMVLQTAG ASVLSVPSNE IYTAMQTGAC DAGLTSSTSL ISFRLEEVAK ALTSGAKASY
WFMLEPLMMS KATFDKLPKN QQDVLLAVGA ELEAFGRKGA QDDDIEVAKV YEKAGAKVAE
LDLETVNKWR DIARDTAWKD YGGKSANCAK LLKLASDVAA
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