| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4050 |
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| Symbol | |
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| ID | 5153101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4249820 |
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| End bp | 4251178 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558883 |
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| Product | putative TRAP-type C4-dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001240022 |
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| Protein GI | 148255437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.926406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.401256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGT TCGGGATTGG GATTGCCTAC GGGGCTGCCA CCCTGTTTGC GATGTTCGCC
GGCATGCCGA TCGCGTTTGC GCTCGGCGCC GTCGCCGTGG TGTTCATGGC GATCTACATG
CCCTCCGCGT CGCTCGATAC GGTGACGCAG AACGTCTATG AGGAAATGGC GTCGATCACG
CTGCTGTCGA TCCCGCTGTT CATCCTCAAG GGCGCCGCGA TCGGCCGCTC CCGCGCCGGC
CAGGATCTCT ACTCGGCGCT GCATGCCTGG CTGCATCGTG TGCCCGGGGG CCTCGGCGTC
GCCAACGTGT TCGCCTGCGC GCTGTTCGCG GCGATGGCCG GCTCGTCGCC GGCGACCTGC
TCGGCGATCG GCTCGGCCGG CATCCCGGAG ATGCGCAAGC GCGGCTATTC CGGCGGGTTC
GCCGCGGGCA TCATCGCCGC CGGCGGCACG CTCGGCATCC TGCTGCCGCC CTCGATCACG
ATGATCCTGT TCGCGATCGC CGCGGAGAAG TCGCTCGGAC GGCTGTTCCT GGCCGGGATC
GGGCCGGGGC TGCTGCTGGT CACGCTGTTC GGCGTCTATG CGGTGGTGCG CTTCCGCCAG
GAATACGCGC AGGCGAAAGC GGTCTACGAG AAGTCGGGCA CCTGGTCGGA TATCCTGATC
AAGGACGAAT ACACGATGGC ACAGCGCTTT TCGGTGCTGC CGCGCGTGAT CCCGTTCGTG
CTCTTGCTGA CCGGCGTCAT GGTGGCGCTC TATGGCGGGT TGGCGACGCC ATCGGAGACC
GCCGGTCTCG GCGGCATTCT CGCGCTCGCC TTGATCGCGC TCATCTACGG TGTCTGGCGT
CCGACCGACC TCGCGCCGAT CATGCGGGCG ACCTTGCGTG AGTCGACGAT GCTGATGCTG
ATCATCGGCA TGTCGCTGCT CTACTCCTAC GTGATGAGCT ATCTGCACAT CTCGCAGTCT
GTCGCCGAAT ACATCGTGGC GATGCACCTG CCGCGTTGGG AGCTGCTGTT CGCGATCCTG
CTGATGGTGG TCGTGCTCGG CTTCTTCCTG CCGCCGGTCT CGATCATCCT GATGACCGCG
CCGATCATCC TGCCGCCGCT GCGTGCGGCG AATTTCGACA TCATCTGGTT CGGCGTCGTC
ATGACGATCG TGATGGAGAT GGGCCTGATC CACCCGCCGG TGGGCTTGAA CATCTTCGTC
ATCCGCAACG TCGCACCGGA CATCCCGCTG CGCGAGGTGA TCTGGGGCAC CCTGCCCTTC
GTGCTGCTGA TGATGGCCGC GGTGCTGCTG CTCTGCTTCG TGCCGCAGAT CTCGACGGCG
CTTCCGGACC TTGTGATGGG GCCGGATCTC AGCCGGTGA
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| Protein sequence | MSVFGIGIAY GAATLFAMFA GMPIAFALGA VAVVFMAIYM PSASLDTVTQ NVYEEMASIT
LLSIPLFILK GAAIGRSRAG QDLYSALHAW LHRVPGGLGV ANVFACALFA AMAGSSPATC
SAIGSAGIPE MRKRGYSGGF AAGIIAAGGT LGILLPPSIT MILFAIAAEK SLGRLFLAGI
GPGLLLVTLF GVYAVVRFRQ EYAQAKAVYE KSGTWSDILI KDEYTMAQRF SVLPRVIPFV
LLLTGVMVAL YGGLATPSET AGLGGILALA LIALIYGVWR PTDLAPIMRA TLRESTMLML
IIGMSLLYSY VMSYLHISQS VAEYIVAMHL PRWELLFAIL LMVVVLGFFL PPVSIILMTA
PIILPPLRAA NFDIIWFGVV MTIVMEMGLI HPPVGLNIFV IRNVAPDIPL REVIWGTLPF
VLLMMAAVLL LCFVPQISTA LPDLVMGPDL SR
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