Gene BBta_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4037 
Symbol 
ID5152552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4236152 
End bp4236913 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID640558869 
Productputative transciptional regulatory Sir2-family protein 
Protein accessionYP_001240009 
Protein GI148255424 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.185162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAT CTGATCTGCA GGATGGCGTG AACCGCTTGG GCGATATGAT CGCGGCCGCC 
AAGGTGATCG TGCCGTTCAC GGGGGCCGGC ATTTCGACGG AGGCCGGCAT CCCCGACTTC
CGTTCGCCCG GAGGGCTATG GACCCGCAAC CGGCCAATCG ACTTCCAGGA GTTCGTCGCC
AGCCAGGATG CCCGCGATGA GGCTTGGCGC CGGCGCTTTG CGATGCAGGA AACGTTTGCG
GCGGCGCGAC CAAGCCGGGG CCACCGCGCA CTCGCCGCGC TCTACCGTGC CGGCAAGATC
CCCGCGGTGA TCACGCAGAA CATCGACAAT CTGCACCAGG ACTCCGGCTT CGCCCCCGAT
CACGTCGTCG AGTTGCACGG CAACACCACT TACGCGCGCT GTATCGGATG CGGGCAACGC
TATGAGATCG GCTGGGTGCA ACAGCGCTAT GCCGCCGACA ACGCTGCGCC CGACTGCCCG
GCCTGTGCCG CGCCGGTGAA GACGGCGACG GTGTCGTTCG GTCAGGCGAT GCCGGAAACG
GAGATGCAGC GCGCGACCGA GCTGGCGCAG CATTGCGATC TCTTCATCGC GATCGGCTCG
TCATTGGTTG TATGGCCGGC GGCGGGCTTT CCATTGATGG CAAAGCAGGC GGGTGCACGA
CTTGTCATCA TCAACCGGGA ACCGACTGAT CAGGACGACG TTGCTGATCT CGTCATTCAC
GATGACATCG GCGAAGTGCT TGGTCCGTTC CTCCGTAATT GA
 
Protein sequence
MIRSDLQDGV NRLGDMIAAA KVIVPFTGAG ISTEAGIPDF RSPGGLWTRN RPIDFQEFVA 
SQDARDEAWR RRFAMQETFA AARPSRGHRA LAALYRAGKI PAVITQNIDN LHQDSGFAPD
HVVELHGNTT YARCIGCGQR YEIGWVQQRY AADNAAPDCP ACAAPVKTAT VSFGQAMPET
EMQRATELAQ HCDLFIAIGS SLVVWPAAGF PLMAKQAGAR LVIINREPTD QDDVADLVIH
DDIGEVLGPF LRN