Gene BBta_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4016 
Symbol 
ID5151766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4221125 
End bp4221892 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID640558848 
Producthypothetical protein 
Protein accessionYP_001239989 
Protein GI148255404 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATTATG CCGACCCGGT GGGTGGCGTC GCCATTATGG ACTTCGTCGA TCCGCGACCG 
CTGTCCGAGC ATCCGGGGAA TACAGCTGGA CTGGTCCGAG AGCTCGGCGG TCTCGTCAAC
CGGCTGCAGT CGACGCCGAC TTTCGTGCCG CTGGACCAGC CGGGCGACAT CGTTGCCACG
GTGCTCGCCA CCTTGGACAG ATCGGGCCTG CTTGCCCGCG GCCTATTGGA TGGTCACAGA
GAGAACCTCG CTCGCATCCG CGCTGCCATT CCCTGGACCC CATGCGGTCT GGTTTCGAGC
CACAATGACC CCAACCCGCG AAACCTGATC TTCGATGGCA GGCGGCTGTG GCTGATCGAC
TGGGAGCTCG CAGCCTGCAA CGATCCGCTG TTCGACTTAG CCATTGTGAC CTTTGAATTG
GCGGCGACCG AGGACCTTGC GAAGGTTCTC TGCGTCGCCG CCGGCAGGAC GCCAAGCCGC
AGCTTCTTGG CTCGGCTGGC CGTGACTCGT TTGCTGGCCC GGCTGTTCTA CGGCGGCATT
GCGCTGGAGG CGTTGGCCGC CGGCCCCGGC GCCGCGCCGG AACACACGAT CGACGGTCTG
ACGCCCGCCG AATTCCACCG CGCCGTCCTC GAGGGACGCC TCGCCGTTGA TGGGCCTGAC
ATCGCCAGGG CATTCGGCAT GATGTCGCTC GCCACCTTCA TGCGAGGCGT GTCGGAGCCC
GGCTTCGACG AAGTGCTCGC ATGGGCTCGC GACGCCGAAG CACCATGA
 
Protein sequence
MHYADPVGGV AIMDFVDPRP LSEHPGNTAG LVRELGGLVN RLQSTPTFVP LDQPGDIVAT 
VLATLDRSGL LARGLLDGHR ENLARIRAAI PWTPCGLVSS HNDPNPRNLI FDGRRLWLID
WELAACNDPL FDLAIVTFEL AATEDLAKVL CVAAGRTPSR SFLARLAVTR LLARLFYGGI
ALEALAAGPG AAPEHTIDGL TPAEFHRAVL EGRLAVDGPD IARAFGMMSL ATFMRGVSEP
GFDEVLAWAR DAEAP