Gene BBta_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4008 
Symbol 
ID5151727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4215134 
End bp4215604 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID640558840 
Producthypothetical protein 
Protein accessionYP_001239981 
Protein GI148255396 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACG CACGCAGCGA TTACACGAGT TTCAGGAACC AGGCGCCGGA GCTCTACGAT 
GCCATCCTCG CGGTGAGCCA GCAGGCGGCC AAGGCCGGTC TCGACAAGCA ACTGCTCGAA
CTGGTCAAGA TCCGGGCGTC GCAGATCAAC GGCTGTGCGT TCTGCGTGCA GCATCACGTG
CTGCTGGCCG AGAAGCTCGG CGTGTCGGCC GACAAGATCA ACCTCGTCGT CGCCTGGCGC
GAAGCGCCGC AGTTTTCGTC CCGGGAGCGC GCGGCGCTCG CCTTCACCGA GGCACTGACC
AAGCTGGATG GCGGCGTCAG CGACGAGGTC TATGGGCTGG CGCGCGCCGA ATTCTCCGAG
ACGGAGTTGG TGTTTCTGAC CTCGGCCATC GGTGTCATCA ATCTCTGGAA TCGCTACGGC
GTCGCCTTCC GCTGGACGCC GGCGGAGCGG CCGGCGCGCG CCACGACCTG A
 
Protein sequence
MSHARSDYTS FRNQAPELYD AILAVSQQAA KAGLDKQLLE LVKIRASQIN GCAFCVQHHV 
LLAEKLGVSA DKINLVVAWR EAPQFSSRER AALAFTEALT KLDGGVSDEV YGLARAEFSE
TELVFLTSAI GVINLWNRYG VAFRWTPAER PARATT