Gene BBta_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3989 
Symbol 
ID5152223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4197169 
End bp4197813 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID640558823 
Producthypothetical protein 
Protein accessionYP_001239964 
Protein GI148255379 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGG CAATGATTGT ATGGGGCGGC TGGCCGGGAC ATGATCCGGA CCTCTGTGCC 
TCGATGATCC GCGGCTGGCT CAAGGCCGAA GGGTTCGAGG TGCAGATCGA GACCACGACC
GCCGCCTTCG CTGACCCCGC GATTCACGAT CTGTCGCTGA TCATCCCGAT CTACACCATG
TCTAAGATTG AGAAGGCGGA AGCACTCAAT CTCTGCGCGG CGGTGCGCAG CGGCGTCGGG
CTCGCCGGGC ATCATGGCGG CATGTGCGAC GCCTTCCGCG ATTCGGTGGA CTACCAGTTT
CTGTGCGGCG GGCAGTGGGT CGCACATCCC GGCAATATCA TCGATTACCG GGTCGACTTG
ACCAGACCGG ACGATCCCAT CATGAAGGGC TTGAAGAGTT TCGAGCACCG GTCCGAGCAA
TACTACATGC ATGTCGACCC GGCCAACGAG GTGTTGGCGA CCACGACGTT CAGCGGCGAG
CACGCACCCT GGATCGAAGG TGTCGTGATG CCGGTGGTTT GGAAGAAGCG ATATGGCGCG
GGCCGCGTGT TCTATTCCTC GCTTGGCCAT CGCGCCTATG AGCTCGACGT TCCGGAGATC
CGCACCTTGA TGACCCGCGG CATGCTATGG GCGGCGCGCG AGTGA
 
Protein sequence
MRKAMIVWGG WPGHDPDLCA SMIRGWLKAE GFEVQIETTT AAFADPAIHD LSLIIPIYTM 
SKIEKAEALN LCAAVRSGVG LAGHHGGMCD AFRDSVDYQF LCGGQWVAHP GNIIDYRVDL
TRPDDPIMKG LKSFEHRSEQ YYMHVDPANE VLATTTFSGE HAPWIEGVVM PVVWKKRYGA
GRVFYSSLGH RAYELDVPEI RTLMTRGMLW AARE