Gene BBta_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3982 
Symbol 
ID5151972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4189719 
End bp4190369 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID640558816 
Productnegative transcriptional regulator 
Protein accessionYP_001239957 
Protein GI148255372 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGC CACCGCCCTT CAAGCCCGAC CGCGCCGCGA GCCTCGGCTT CGCTGACGCG 
CGCGGCTTCG GCACGGTCTG CGCGTGGGAT GGCTCCAAGC CGATCGCATC TCTGGTGCCA
TTTCATCTGG GCGCGTTGAA CGACGGCACG CCGCAGGCGT TCTTTCATGT CGCGCGCAAC
AATCCGCTGG CAAAGGTTGC CGACGGCGCG ACGCCCTGGC TGCTCGCCGT CAGCGGCGCC
GATGCCTATG TCTCGGCCGA TTGGTACGTG TCGCCAGATC AGGTTCCGAC CTGGCTCTAT
CAGGCGGTGC ATCTGACCGG CACGGCGCGG ATCTTGTCGG AGGCCGAGCT CGCGCGGCAG
GTCGATGAGG TCAGTGCCAA GTTCGAGCAG CGGCTGCTGC CGAAGAAGCC CTGGACCTCG
GACAAGATGA CGGCGGGACG CCTCGAGGCG ATGCGCAAGG CGATCGTCGG CATCGTCATG
ACGATCGACC AGGTCGAAGG CAGCTTCAAG CTCAACCAGC ACAAATCCGA GGCGGACTAC
GCGGCGATCG CGACCAGGCT CGGCGAGCAG CCCGACATCG GCTCGCAACA GATTTCGTCT
CTCATGCGGC AGGCGCGGCC CCAGGCCTTT GCCGGCGAAA CCCAGACCTG A
 
Protein sequence
MYTPPPFKPD RAASLGFADA RGFGTVCAWD GSKPIASLVP FHLGALNDGT PQAFFHVARN 
NPLAKVADGA TPWLLAVSGA DAYVSADWYV SPDQVPTWLY QAVHLTGTAR ILSEAELARQ
VDEVSAKFEQ RLLPKKPWTS DKMTAGRLEA MRKAIVGIVM TIDQVEGSFK LNQHKSEADY
AAIATRLGEQ PDIGSQQISS LMRQARPQAF AGETQT