Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3982 |
Symbol | |
ID | 5151972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4189719 |
End bp | 4190369 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558816 |
Product | negative transcriptional regulator |
Protein accession | YP_001239957 |
Protein GI | 148255372 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACGC CACCGCCCTT CAAGCCCGAC CGCGCCGCGA GCCTCGGCTT CGCTGACGCG CGCGGCTTCG GCACGGTCTG CGCGTGGGAT GGCTCCAAGC CGATCGCATC TCTGGTGCCA TTTCATCTGG GCGCGTTGAA CGACGGCACG CCGCAGGCGT TCTTTCATGT CGCGCGCAAC AATCCGCTGG CAAAGGTTGC CGACGGCGCG ACGCCCTGGC TGCTCGCCGT CAGCGGCGCC GATGCCTATG TCTCGGCCGA TTGGTACGTG TCGCCAGATC AGGTTCCGAC CTGGCTCTAT CAGGCGGTGC ATCTGACCGG CACGGCGCGG ATCTTGTCGG AGGCCGAGCT CGCGCGGCAG GTCGATGAGG TCAGTGCCAA GTTCGAGCAG CGGCTGCTGC CGAAGAAGCC CTGGACCTCG GACAAGATGA CGGCGGGACG CCTCGAGGCG ATGCGCAAGG CGATCGTCGG CATCGTCATG ACGATCGACC AGGTCGAAGG CAGCTTCAAG CTCAACCAGC ACAAATCCGA GGCGGACTAC GCGGCGATCG CGACCAGGCT CGGCGAGCAG CCCGACATCG GCTCGCAACA GATTTCGTCT CTCATGCGGC AGGCGCGGCC CCAGGCCTTT GCCGGCGAAA CCCAGACCTG A
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Protein sequence | MYTPPPFKPD RAASLGFADA RGFGTVCAWD GSKPIASLVP FHLGALNDGT PQAFFHVARN NPLAKVADGA TPWLLAVSGA DAYVSADWYV SPDQVPTWLY QAVHLTGTAR ILSEAELARQ VDEVSAKFEQ RLLPKKPWTS DKMTAGRLEA MRKAIVGIVM TIDQVEGSFK LNQHKSEADY AAIATRLGEQ PDIGSQQISS LMRQARPQAF AGETQT
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