| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3980 |
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| Symbol | parE |
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| ID | 5151688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4186611 |
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| End bp | 4188674 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558814 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001239955 |
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| Protein GI | 148255370 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGC CATTGAAATC AGCTGCAAAA GCCAAGGCCA AGGGCGTCGT CGACCCGCTG
GCGGCGCTCG CCGCCAAGGG TAAGGCCCAG GCCAAGCCAG CCGCCCGCGC GGCAGGTTCC
GAGGGCGAGT ACACCGCGCG CGACATCGAG GTCCTGGAGG GCCTGGAGCC GGTGCGGCGG
CGCCCGGGCA TGTATATCGG CGGCACCGAC GAGAAGGCGC TGCACCACCT GTTCGCCGAG
GTCATCGACA ATTCGATGGA CGAGGCGCTG GCGGGTCACG CCACCTTCAT CGAGGTCGAA
CTCGACGCCC AGGGCTTCCT CACGGTGACC GACAATGGCC GCGGCATCCC GGTCGATCCG
CATCCGAAAT TCCCGAAGAA GTCGGCGCTC GAAATCATCA TGTGCACGCT GCACGCCGGC
GGCAAGTTCG ACTCCAAGGT CTACGAGACC TCGGGCGGCC TGCACGGCGT CGGCATCTCC
GTGGTGAACG CACTCTCGAC CCGGCTCGAG GTCGAGGTCG CGCGCAACCA GAAGCTCTAC
CGGATGATTT TCGAGCGCGG CCATCCCAAG GGCAAGCTCG AGGAGATCGG CAAGGTCGCC
AACCGACGTG GCACCAAGGT CCGCTTCCAG CCCGACCCGA CCATCTTCGG TGCCAAGGCG
ACGTTCAAGC CGCAACGCCT GTTCAAGATG GCCCGCTCCA AAGCCTATCT GTTCGGCGGT
GTCGAGATCC GCTGGAAGTG CGATCCGTCG CTGTTGAAGG GCATCGAGGA CGTCCAGCCC
GAGGCGACCT TCCACTTCCC CGGCGGCCTG AAGGATTATC TGGCGGCGGC GATCCATGCC
GACACGTTGG TCCATCCCGA CATCTTCGCC GGCAAGTCAG GCCGCACCGG TGGCCATGGC
GGCTGCGAAT GGGCGGTGGC CTGGACCGCC GACGCCGACG GCTTCCTCTC GTCCTACTGC
AACACCATCC CGACCCCCGA CGGCGGCACG CACGAATCCG GCATCCGCAG CGCCCTGCTC
CGCGGCCTGA AGGACCACGC CGAGCGCGTC GGCCAGGGCA AGCGCTCGGC CAACATCACC
TCCGAGGACA TCATGGCGGG TGCCGCCATC ATGCTCTCGG TGTTCGTGCG CGAGCCGGAA
TTCCAGGGCC AGACCAAGGA TCGCCTGGCG ACGGCCGAGG CACAGCGCAT CGTCGAGCAG
GCGGTCAAGG ATCCGTTCGA TCACTGGCTG TCCGGCAATC CGGTGCAGGC CAATCGCCTG
CTCGATTTCG TCATTGAGCG CGCAGAGGAG CGGATCCGCC GCCGCCAGGA AAAGGAGACA
GCGCGCAAGA CCGCGACCAA GAAGCTGCGC CTTCCCGGCA AGCTTGCCGA CTGCACCGAC
GCCGGCACCG AGGGCTCCGA GCTGTTCATC GTCGAGGGCG ATTCGGCCGG CGGCAGCGCC
AAACAGGCGC GCGACCGCAA GAAGCAGGCG GTGCTGCCCC TGCGCGGCAA GATCCTCAAC
GTCGCCTCGG CCGGCAAGGA CAAGCTCACC GCCAACGCCC AGCTCGCCGA CCTCGTGATG
GCCATCGGCG CCGGCACCGG CACGTCGTAT CGCGAAGAGG ATCTGCGTTA CCAGCGTATC
ATCATCATGA CCGACGCCGA CGTCGACGGC GCCCACATCG CCTCTCTGTT GATCACCTTC
TTCTACCGGC AGATGCCGCG GCTGATCGAC GAGGGCCATC TCTATCTGGC AGTGCCGCCG
CTTTACCGCC TGACCCACAA CAGCAAGACC TTCTATGCCC GCGACGAGGC CCACCGGGAC
GAGATCCTGA AGCGCGAGTT CAACGCCAAC GCCAAGGTCG ACATCGGCCG CTTCAAAGGC
CTGGGCGAAA TGATGCCGGC GCAGCTGAAG GAGACCACGA TGGATCCGGC CAAGCGGACC
CTGTTGCGCG TCGTGCTGCT GGCCGACGAT CGCGACGGCA CCGCCGACTC GGTCGAGCGG
TTGATGGGGA CCAAAGCGGA GGCACGCTTC GCTTTTATTT CGGAAAAGGC GGAATTCGCC
AGCGACGAGC TGCTCGACGT CTAG
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| Protein sequence | MGKPLKSAAK AKAKGVVDPL AALAAKGKAQ AKPAARAAGS EGEYTARDIE VLEGLEPVRR
RPGMYIGGTD EKALHHLFAE VIDNSMDEAL AGHATFIEVE LDAQGFLTVT DNGRGIPVDP
HPKFPKKSAL EIIMCTLHAG GKFDSKVYET SGGLHGVGIS VVNALSTRLE VEVARNQKLY
RMIFERGHPK GKLEEIGKVA NRRGTKVRFQ PDPTIFGAKA TFKPQRLFKM ARSKAYLFGG
VEIRWKCDPS LLKGIEDVQP EATFHFPGGL KDYLAAAIHA DTLVHPDIFA GKSGRTGGHG
GCEWAVAWTA DADGFLSSYC NTIPTPDGGT HESGIRSALL RGLKDHAERV GQGKRSANIT
SEDIMAGAAI MLSVFVREPE FQGQTKDRLA TAEAQRIVEQ AVKDPFDHWL SGNPVQANRL
LDFVIERAEE RIRRRQEKET ARKTATKKLR LPGKLADCTD AGTEGSELFI VEGDSAGGSA
KQARDRKKQA VLPLRGKILN VASAGKDKLT ANAQLADLVM AIGAGTGTSY REEDLRYQRI
IIMTDADVDG AHIASLLITF FYRQMPRLID EGHLYLAVPP LYRLTHNSKT FYARDEAHRD
EILKREFNAN AKVDIGRFKG LGEMMPAQLK ETTMDPAKRT LLRVVLLADD RDGTADSVER
LMGTKAEARF AFISEKAEFA SDELLDV
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