| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3977 |
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| Symbol | |
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| ID | 5151685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4184400 |
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| End bp | 4185167 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558811 |
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| Product | putative 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001239952 |
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| Protein GI | 148255367 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.686311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAC GATTCGATCT TCGCGGCAAG GTCGCGATCG TGACGGGGGG CAATGGTGGC
ATCGGCCTGG GCATGGCTCG CGGCCTGGCT GATTCCGGCG CCGATATCGC CGTGGTCGGC
CGTAACGCGG CCAAGTCGAA GACCGCTGTC GCCGATCTCG CCGGCCGCGG CGTGCGTGCC
ATCGCCGTTA CCGCCGATGT CAGCAACCAG TACGATGTGG CCGCCATGGT CGCGCAGGTC
TCGCGCGAGC TCGGCCGCAT CGACATCCTG ATCAACAATG CCGGCATGAG CATCCGCAAG
CCGCCCCATC TGCTGGAGCT CGAGGAGTGG CGCGAGGTGA TCGACACCAA TCTCACCAGC
GCGTTTCTGT GTTCAAAGGC CGCCTACCCC GCGCTCAAGG CGAATGGCGG CGGCAAGATC
ATTAACATCG GCTCGATGCT GTCGATCTTC GGCGCCAGCT TTGCGCCGGC CTATGCCGCC
AGCAAGGGCG GCATCGTGCA GTACACGCGC GCCTGTGCCT GCGCCTGGGC GCCTGACAAC
ATCCAGGTCA ATGCGATCCT GCCGGGCTGG ATCGACACCG ACCTCACCCG TGCCGCGCGC
CAGCAGATCG ACGGCCTGCA TGACCGCGTG CTGGCGCGGA CCCCCGCCGG CCGCTGGGGC
GATATCGACG ACTTTGCCGG CATCGCCACC TTCCTGAGCT CACCGGCGTC GGACTTCGTC
ACCGGCACAG CCATTCCAGT CGATGGCGGC TATTCGATCT CGGCCTGA
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| Protein sequence | MTGRFDLRGK VAIVTGGNGG IGLGMARGLA DSGADIAVVG RNAAKSKTAV ADLAGRGVRA
IAVTADVSNQ YDVAAMVAQV SRELGRIDIL INNAGMSIRK PPHLLELEEW REVIDTNLTS
AFLCSKAAYP ALKANGGGKI INIGSMLSIF GASFAPAYAA SKGGIVQYTR ACACAWAPDN
IQVNAILPGW IDTDLTRAAR QQIDGLHDRV LARTPAGRWG DIDDFAGIAT FLSSPASDFV
TGTAIPVDGG YSISA
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