Gene BBta_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3971 
Symbol 
ID5151533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4178464 
End bp4178868 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID640558806 
ProductIron-sulfur cluster assembly protein 
Protein accessionYP_001239947 
Protein GI148255362 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR01997] FeS assembly scaffold SufA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0542987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TGAACAATAC GCCAGCGCCC ATCGTCAGCA AGCCCAAGCC GCGGCCCCGT 
CCGCAGGTCA TGCGTTTGAC CGACGCCGCT GCCACGCGCA TCCGCGAGCT GATGCAGCGG
GCCGAGTCGG AGATCATTGG CCTGCGGGTC GGCGTGAAGA ACGGCGGCTG CGCCGGCCAG
TCCTACACGG TCGAATATGC TCACGACATC CGCCCGACGG ACGAGGTGGT GGAGGACAAG
GGCGTCAAGA TCATGGTCGA TCCCAAGGCC GTGCTGTTCC TGCTCGGCAC CGAGATGGAT
TATCAGGCTG ACAGGATGCA GGCCCAGTTC GTCTTCAACA ACCCCAATCA GATCAGCGCC
TGCGGTTGCG GCGAGTCGGT GCAGCTGAAG CCTGCCGAGG TCTGA
 
Protein sequence
MTDMNNTPAP IVSKPKPRPR PQVMRLTDAA ATRIRELMQR AESEIIGLRV GVKNGGCAGQ 
SYTVEYAHDI RPTDEVVEDK GVKIMVDPKA VLFLLGTEMD YQADRMQAQF VFNNPNQISA
CGCGESVQLK PAEV