Gene BBta_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3963 
Symbol 
ID5151477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4169903 
End bp4170550 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID640558798 
Producthypothetical protein 
Protein accessionYP_001239939 
Protein GI148255354 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TCATCTTCAA CGGTCCGGCC GGCCGCCTCG AAGGCCGTTA CCATCCGGCG 
AAGCAGAAGA ACGCGCCGAT CGCGATGATC CTGCATCCGC ATCCGCAGTT CCACGGCACG
ATGAACCACC AGATCGTGTA TCAGTGCTAC TACGCCTTCG CGCATCGCGG CTTTTCGGTG
CTGCGCTTCA ATTTCCGCGG CGTCGGCCGC AGCCAGGGCT CGTTCGACCA TGGCACCGGC
GAATTGTCCG ATGCGGCGTC GGCGCTCGAT TGGGCGCAGA CCATCAACCC CGAAGCCCGT
GCCTGCTGGG TCGCCGGTTT CTCCTTCGGC GCCTGGATCG GCATGCAGCT CCTGATGCGC
CGTCCCGAGG TCGAGGGCTT CATTTCGATC GCCCCGCCCG CCAACCTCTA CGACTTCTCC
TTCCTGGCGC CCTGCCCGTC CTCGGGCCTG ATCGTCCATG GCGAGAAGGA CGCGGTCGTC
CCGCCGAAGG ACGTCAACAC GCTGGTGGAG AAGCTCAAGA CTCAAAAGGG CATCGTCATC
GACCAGCAGA TCATCCCCGG CGCCAACCAC TTCTTCGACG GCAAGCTCGA GCCGCTGATG
GAGACGATCA CGGCTTATCT GGATATGCGC CTCGCCAATG TGAGGTGA
 
Protein sequence
MPEVIFNGPA GRLEGRYHPA KQKNAPIAMI LHPHPQFHGT MNHQIVYQCY YAFAHRGFSV 
LRFNFRGVGR SQGSFDHGTG ELSDAASALD WAQTINPEAR ACWVAGFSFG AWIGMQLLMR
RPEVEGFISI APPANLYDFS FLAPCPSSGL IVHGEKDAVV PPKDVNTLVE KLKTQKGIVI
DQQIIPGANH FFDGKLEPLM ETITAYLDMR LANVR