Gene BBta_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3956 
Symbol 
ID5151810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4157150 
End bp4157857 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID640558791 
Producthypothetical protein 
Protein accessionYP_001239932 
Protein GI148255347 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGG AATCACGAAA GAAATCCTCC AATCCGGGAG TCCGCGATGG GATCGCGGGG 
AACCGGGCCG CAATGGCCGC CAAGAAGGCC GTCAAAAAGA CCGCCAAGCC CGTGACGACG
AAGCCTGCCA AGGCGACCAA GACGACAACA GCCAAGACGA CCGTCGCCAA GAAGGCAGCC
AAGCCCGCGA CCAAGCCCTC GGCGAAGGCG AAGCCCGCAT CGACCATCCC CGCTGCAGGC
GGAATCGTAC TGGCCGAGGG CGCCAAGGCC CCTGCCTTCA AGCTGCCGCG CGACGGCGGC
GGAACCGTTT CGCTGGCCGA CTATGCCGGA CAAAAGCTGG TGTTGTTCTT CTATCCGAAA
GCCAATACCC CCGGATGCAC CAAGGAAGCG ATCGACTTCA CCCGCCTGAC CAAGGAGTTT
GCCGCCGCCG GCACCGCGGT GCTCGGCGTA TCCGCCGATT CGGTCAAGGC GCAGGACAAT
TTCCGCGACA AGCACGATCT GGCCGTGCCG CTGATCTCCG ACGAGACGCA CGAGATGCTG
GAGGCCTATG GCGCCTGGGG CGAGAAATCC CTCTATGGCC GCAAATTCCT CGGCATCATC
CGGAGCACGG TGCTGATCGG CGCCGACGGC CGCGTCGCCA AAGTGTGGCG CAACGTCAAG
GTCGACGGCC ATGCCGACGC CGTGCTCACG GCGGCGCGCG AGCTCTGA
 
Protein sequence
MSKESRKKSS NPGVRDGIAG NRAAMAAKKA VKKTAKPVTT KPAKATKTTT AKTTVAKKAA 
KPATKPSAKA KPASTIPAAG GIVLAEGAKA PAFKLPRDGG GTVSLADYAG QKLVLFFYPK
ANTPGCTKEA IDFTRLTKEF AAAGTAVLGV SADSVKAQDN FRDKHDLAVP LISDETHEML
EAYGAWGEKS LYGRKFLGII RSTVLIGADG RVAKVWRNVK VDGHADAVLT AAREL