Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3956 |
Symbol | |
ID | 5151810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4157150 |
End bp | 4157857 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558791 |
Product | hypothetical protein |
Protein accession | YP_001239932 |
Protein GI | 148255347 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.151372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGG AATCACGAAA GAAATCCTCC AATCCGGGAG TCCGCGATGG GATCGCGGGG AACCGGGCCG CAATGGCCGC CAAGAAGGCC GTCAAAAAGA CCGCCAAGCC CGTGACGACG AAGCCTGCCA AGGCGACCAA GACGACAACA GCCAAGACGA CCGTCGCCAA GAAGGCAGCC AAGCCCGCGA CCAAGCCCTC GGCGAAGGCG AAGCCCGCAT CGACCATCCC CGCTGCAGGC GGAATCGTAC TGGCCGAGGG CGCCAAGGCC CCTGCCTTCA AGCTGCCGCG CGACGGCGGC GGAACCGTTT CGCTGGCCGA CTATGCCGGA CAAAAGCTGG TGTTGTTCTT CTATCCGAAA GCCAATACCC CCGGATGCAC CAAGGAAGCG ATCGACTTCA CCCGCCTGAC CAAGGAGTTT GCCGCCGCCG GCACCGCGGT GCTCGGCGTA TCCGCCGATT CGGTCAAGGC GCAGGACAAT TTCCGCGACA AGCACGATCT GGCCGTGCCG CTGATCTCCG ACGAGACGCA CGAGATGCTG GAGGCCTATG GCGCCTGGGG CGAGAAATCC CTCTATGGCC GCAAATTCCT CGGCATCATC CGGAGCACGG TGCTGATCGG CGCCGACGGC CGCGTCGCCA AAGTGTGGCG CAACGTCAAG GTCGACGGCC ATGCCGACGC CGTGCTCACG GCGGCGCGCG AGCTCTGA
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Protein sequence | MSKESRKKSS NPGVRDGIAG NRAAMAAKKA VKKTAKPVTT KPAKATKTTT AKTTVAKKAA KPATKPSAKA KPASTIPAAG GIVLAEGAKA PAFKLPRDGG GTVSLADYAG QKLVLFFYPK ANTPGCTKEA IDFTRLTKEF AAAGTAVLGV SADSVKAQDN FRDKHDLAVP LISDETHEML EAYGAWGEKS LYGRKFLGII RSTVLIGADG RVAKVWRNVK VDGHADAVLT AAREL
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