| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3955 |
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| Symbol | |
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| ID | 5151541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4155682 |
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| End bp | 4157043 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558790 |
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| Product | putative metalloendopeptidase |
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| Protein accession | YP_001239931 |
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| Protein GI | 148255346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.862096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATC GTTCCGGCCA GTACGCCGAA TATCCCCAGC ACCATTCGCA TGACCGCGGG
CGCGCCGTGC AGCAGCGGCG CTCTCCGGTC GGTCACCCTG CCCCCGCTCC GGCCACCTCG
CAGAGCGACT ACACGCTGGT GCATGCCGGC CGCCAGGTCC GAATCGGCCC GGTCGTGTTC
TGGATCGTCG TCGGCACCGT CAGCCTGCTC GGCCTGTGGT CGGCGGCGAC CGCCACCTAT
TTCGCATTCC GCGACGACGT GCTGACGCGC CTGATCGCCC GTCAGGCCGA GATGCAATAC
GCCTATGAGG ATCGGATCGC GGAGCTGCGC GCCAAGGTCG ATCGCGCCAC CAGCCGTCAA
TTGCTCGACC AGGAGCAGTT CGACCAGAAG CTCGACCAGA TCCTGAAGCG CCAGACCGCG
CTCGAGGGCC GCGCCACCGC GCTGGGCAGC ATTCCCGATG TGACCGGCGC GATCCGTCCG
CCGGCGCGCG GCCCCGCGAT CGAGCCGTCC GCCGCGCCGG CCACGCCGAA GCCGTCGCCG
ATCAGCGATA CCGTGATCTT CACGGCGCCG CCAGACCGTG AGGCGCGGCT GGAATCGCGC
AGCCCCGTGC TGGCGAACGT GCAACCGAAC CAGGCGACCA AGCTCGCCGG CGTCGACAAT
GTGCTGACGC GGCTGACGCG CTCGCTCGAC CAGGTCGAAG CGCGGCAGCT GGCAATGCTG
TCGTCGGCGG AAGAGACGCT CGAATCGAAG CTGCGCCGGA TGCGCGGCGT GATCACCGAT
CTCGGCCTCG ACATGGGCCA GCTCGAAGCT GCGGCCCCGA AGGGCGCGAT GGGCGGCCCC
TTCGTGCCGG TAAAGCTCGG CGCCGAATCC GGCCCGTTCG AGCGCCAGCT CTATCGCATC
AACATCACCC GCGCGCAGGT CGAGAAGATG AACCGCACGC TGTCGCTGGT GCCCTATCGC
AAGCCGGTCA TCGGAGAGGT CGAGTTCACC TCCGGATTTG GCGTGCGCTC CGATCCGTTC
CTCGGCCGGC CCGCGATGCA CACGGGCCTC GATTTCCGTG CAGCCACAGG CGATCCGGTC
CGCGTCACCG CCAATGGAAA GGTGGTCAAT GCTGGCTGGT CAGGCGGCTA TGGCCGCATG
GTCGAGGTCG ATCATGGCAA CGGCCTGTCC ACCCGTTATG GCCATCTCTC CGAGATCAAC
GTCAAGATCG GCCAGCAGGT GAAGATCGGC GACATCATCG GTGAGGTCGG CTCGACCGGC
CGCTCGACCG GCCCGCATCT GCACTACGAA ACGCGCATCG ACGGCGAGGC GGTCGACCCG
CAGAAATTCC TGCGCGCCGG CGTGCGGCTC AGCGCCGGTT GA
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| Protein sequence | MSHRSGQYAE YPQHHSHDRG RAVQQRRSPV GHPAPAPATS QSDYTLVHAG RQVRIGPVVF
WIVVGTVSLL GLWSAATATY FAFRDDVLTR LIARQAEMQY AYEDRIAELR AKVDRATSRQ
LLDQEQFDQK LDQILKRQTA LEGRATALGS IPDVTGAIRP PARGPAIEPS AAPATPKPSP
ISDTVIFTAP PDREARLESR SPVLANVQPN QATKLAGVDN VLTRLTRSLD QVEARQLAML
SSAEETLESK LRRMRGVITD LGLDMGQLEA AAPKGAMGGP FVPVKLGAES GPFERQLYRI
NITRAQVEKM NRTLSLVPYR KPVIGEVEFT SGFGVRSDPF LGRPAMHTGL DFRAATGDPV
RVTANGKVVN AGWSGGYGRM VEVDHGNGLS TRYGHLSEIN VKIGQQVKIG DIIGEVGSTG
RSTGPHLHYE TRIDGEAVDP QKFLRAGVRL SAG
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