| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3954 |
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| Symbol | |
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| ID | 5151540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4154389 |
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| End bp | 4155606 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558789 |
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| Product | hypothetical protein |
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| Protein accession | YP_001239930 |
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| Protein GI | 148255345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.10149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.332371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCA GCGGCAAAGC GGTGATCCGC ATCGTCCTCG GCGTGGTGGC CGTCGCCGTG
ACGGCGGTCG CGCTGATCTT CGTGTTCGAC CCAGCCATCA ATTTTGATTT TCCGCCCTCC
GCCAGGGAGA AGACGGCAGC GGGCGCAGGG GCGCCGGCCC AGTCCGGATC GGGCGGGGTC
GCCGTGCAAA CTCCTGGCGC TCAGGACCAG GATCGCGCTG CAAGCCCGCT CGCCAAGATG
CAGCAGCAGG CGGGTGGTCT CGCAGACGTG CTGAGCCCGC TCGTTCCTCA GCCGAGTGCC
GATAGCGATT TGCCGGCGTT TGACGTGGTC AATGTCGACC CATCGGGTGA CGCCGTCGTC
GCGGGCCGGG CGACGCCTGG GGCCGCCGTG GAACTGCTGC GCAATGGCGA GGTCCACGAT
CGCACCGTTG CGGATCGTTC CGGGCAGTTT GCCATGGTTC CACGGCGGCT CCCTGCGGGG
ACCTACGATC TGACCTTGCG GGCGAAGCTC GCGGATGGGC GAGAGCTGTC CTCGAAACAG
AGCGTTGCCG TCATCGTCGA GGCTGGCCGA CAGCCGGCGA CCGTGGCCCT GCTCGCGCCC
GGCGAACCGA CCCGCGTTCT CTCGAAGCCT TCGGGATCGA TCCCGCAGGC GCTCGCGGTG
GACGCGGTCG ACGTCGAGCC GAGCGGCATC CTCCGCGTCA GCGGCCGCGC GCGGCCGGGG
GCGACCGTGA GACTTTACCT GAATGATCGC CTGATCTCCT CGGCGATCGC AGCCGCCGAT
GGACGTTTGA ACATCACCAT CGGCAAGGAC GTGGCGCGCG CCAGCAACGA CCGGATCCGG
CTCGACGAGG TGGATCCGAA GTCGGGATCG GTTCAGGCCC GGGCCGAGGT GCCGTTAAGT
CTGCCGGAGG ACTCGACGAC CGCCTCGCTG CCATCAGCCG CGGGAGCTGC AGGCAAGGCG
AACGGCAGTC CGGCAGCTCA GCGCACAGCG CTCGCAGCCG CGGGTGGTTC CCAGGACACG
GTCGCTCATG CCGGCGGAGG TGAGCCGAAG ATGATCACCG TCACCGTCGC CCGCGGCGAC
AGCCTGTGGC ACATCAGCCG GCGCCTGCTC GGCGGTGGGA CGCGCTACGC CGTGATCTAC
AAGGCCAATC GCGAGCAGAT CCGCAGTCCC GACCTGATCT ATCCGGGTCA GGTGTTCCTG
CTGCCGGCCA AGCGATAA
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| Protein sequence | MIVSGKAVIR IVLGVVAVAV TAVALIFVFD PAINFDFPPS AREKTAAGAG APAQSGSGGV
AVQTPGAQDQ DRAASPLAKM QQQAGGLADV LSPLVPQPSA DSDLPAFDVV NVDPSGDAVV
AGRATPGAAV ELLRNGEVHD RTVADRSGQF AMVPRRLPAG TYDLTLRAKL ADGRELSSKQ
SVAVIVEAGR QPATVALLAP GEPTRVLSKP SGSIPQALAV DAVDVEPSGI LRVSGRARPG
ATVRLYLNDR LISSAIAAAD GRLNITIGKD VARASNDRIR LDEVDPKSGS VQARAEVPLS
LPEDSTTASL PSAAGAAGKA NGSPAAQRTA LAAAGGSQDT VAHAGGGEPK MITVTVARGD
SLWHISRRLL GGGTRYAVIY KANREQIRSP DLIYPGQVFL LPAKR
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