| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3953 |
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| Symbol | |
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| ID | 5151539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4153071 |
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| End bp | 4154237 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558788 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001239929 |
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| Protein GI | 148255344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.239618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATC TCACCCGCTG TGTTCAGCAC CCCACAGTGT CCCATGACGG CTTTTCGTCA
CTCGCGGTTC CGACCTTTCG CGCCTCGACC ATTGTCTATA GCGATCCGCA GGCGTTCGCG
CATCGCGCGG AGCGCGGCCT GGACGGCTAC ACTTACGGCC TGCATGGAAC GCCCACGACG
CGGACCTTGG AAGCGCAACT GACGGCGCTG CATGGCGGCG AACGCACCGT GTTGGTTCCG
TCCGGGCAGG CGGCCGTCGC GGTGACGATG ATTGCGGTGC TCAAGCCGGG CGACAAGGTG
CTGATACCGG ATCACGTCTA TCCACCGGTA CGTGACCTGT GCGCGAACTA TCTCGCGTCG
CGCGGCATCT CTTACGCGGT CTATGATCCG CTGATCGGCG CCGGTATTGC CGACCTCATT
GATGCCAGCA CGAAGCTCAT ATGGCTGGAG TCGCCGGGCT CCGGAACAAT GGAGGTGCAG
GATGTCGCGG CGATCGCTGC CGTCGCGAAG GCGAGGGGCG TGCTGACGGG CTGCGACAAT
ACCTGGGCCA GTCCGTTGTT GTTCAAGCCG CTGGCGCATG GCGTCGATTT CGCGATCGAG
GCGCTGACGA AATATGTCGG CGGCCATTCC GACCTGCTGC TGGGCTCGAT CACGGTCAAG
GATCTGGCTC TGCGCAGCGC GCTCAAGCAG GTGCTGGGCG TACTCGGCAT CGGCGTCTCG
CCCGACGAGG CGGCGCTGGC CTTGCGTGGT ATCGAGACGA TGGGCGTTCG CATCGCGCAT
AGCGGCCGTG TCGCGCGTGA CTTTGCCGAA CGGCTGCAGA GCGTGCCTGC GGTTGCGCGT
GTTCTGCATC CGGCGCTGCC GTCCTGTCCG GGTCACGAGA TCTTTGCGCG CGATTACACC
GGCGCGAGCG CCGTTTTCAG CATCGTGATC CGGCCGGAGT TCACGGCGCG GATCCCTGTT
GCGCTCGGAC ATCTGCGGTT GTTCGCGATT GGCGCGTCGT GGGGCGGCAC CCACAGCCTG
ATCGCACCGA TGGACGTCGC GGCCAGCCGC ACGGTGCGCC CTTGGAATCC GGTGGAGGGA
TTGGTCCGGC TCAGCATCGG CCTCGAAGAG CCAAACGAAC TCTGGGAGGA CCTCACGCGC
TTTCTTGCGG CGCTCGGGTC CGGCTGA
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| Protein sequence | MHDLTRCVQH PTVSHDGFSS LAVPTFRAST IVYSDPQAFA HRAERGLDGY TYGLHGTPTT
RTLEAQLTAL HGGERTVLVP SGQAAVAVTM IAVLKPGDKV LIPDHVYPPV RDLCANYLAS
RGISYAVYDP LIGAGIADLI DASTKLIWLE SPGSGTMEVQ DVAAIAAVAK ARGVLTGCDN
TWASPLLFKP LAHGVDFAIE ALTKYVGGHS DLLLGSITVK DLALRSALKQ VLGVLGIGVS
PDEAALALRG IETMGVRIAH SGRVARDFAE RLQSVPAVAR VLHPALPSCP GHEIFARDYT
GASAVFSIVI RPEFTARIPV ALGHLRLFAI GASWGGTHSL IAPMDVAASR TVRPWNPVEG
LVRLSIGLEE PNELWEDLTR FLAALGSG
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