Gene BBta_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3950 
Symbol 
ID5151639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4147109 
End bp4147582 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID640558785 
Producthypothetical protein 
Protein accessionYP_001239926 
Protein GI148255341 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.308895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.373552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAT TTTCCAACAA GCGGCGCGTG CCGCACACGG CCGACCAGAT GTTCGACCTC 
GTCGCCGATG TCGAGCGCTA CCCTGAATTC GTGCCGCTGT GCGAGCGGCT GGTGGTGCGG
CAGCGCAGCC AGAAGCCCGA TGGTCTCGAG GTGATCGTCG CCGACATGAC GGTATCGTTC
AAGCTGGTCA AGGAGACCTT CACCAGCCGC GTCACGCTCG ACCGTGCGGG ACGCAAGATC
CTGGTCGAAT ATGTCAGCGG GCCGTTTTCG AGCCTCGAGA ACCGCTGGAG CTTCGAGCCG
CGCGAGCAGA GCGCCTGCGA GGTGACGTTC TTCATCGCCT ATGAGTTCAA GAGCCGCATG
CTGGCGATGC TGATGGGCTC GATGTTCGAC ACCATCTTCG CGCGCATGTC GGCGGCGTTC
GAAAAGCGCG CCGATGCGAT CTACGGCCGC AAGCCGGCGG TGTCGTCGAC GTAA
 
Protein sequence
MPRFSNKRRV PHTADQMFDL VADVERYPEF VPLCERLVVR QRSQKPDGLE VIVADMTVSF 
KLVKETFTSR VTLDRAGRKI LVEYVSGPFS SLENRWSFEP REQSACEVTF FIAYEFKSRM
LAMLMGSMFD TIFARMSAAF EKRADAIYGR KPAVSST