| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3949 |
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| Symbol | lipA |
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| ID | 5151638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4146139 |
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| End bp | 4147098 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558784 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001239925 |
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| Protein GI | 148255340 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.331367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCA TCGTCGACAC GCTCTCGAAC ACGCCGCTGC GCCCGCGCCA CCCCGAAAAA
GCGAACCGGC CGGATTCCAT CTCGCCGGCG AAACCCAGCT GGATTCGCGT CAAGGCGCCG
ACCACCCGCG GCTATGCCGA CACCCGCAAT ATCGTGCGCG AGAACGGCCT CGTGACCGTG
TGCGAGGAGG CGGGCTGCCC GAACATCGGC GAGTGCTGGG ACAAGAAGCA CGCCACCTTC
ATGATCATGG GCGACACCTG CACGCGGGCC TGCGCCTTCT GCAACGTCAA GACCGGCCTG
CCGGCCGCGC TCGACGCCGG TGAGCCTGAG CACGTTGCGG AAGCCACCTT CAAGCTCGGC
CTCGCCCATG TCGTCGTCAC CTCGGTCGAC CGCGACGATC TCGCGGATGG CGGCGCCGCC
CATATCGCCG CGACCATCCG CGCCATTCGC GCGACATGCC CGACCACCAC GATCGAGGTG
CTGACTCCGG ACTTTCTCCG CAAGGACGGT GCGCTGGAGC AGGTCGTCGC GGCAAAGCCC
GACGTCTTCA ACCACAATCT CGAAACCGTG CCGTCGCGCT ATCTCTCGGT TCGTCCGGGC
GCCCGCTACT TCCACTCGAT CCGACTGCTG CAGCGGGTCA AGGAGATCGA TCCCACCATC
TTCACCAAAT CCGGCATCAT GGTCGGCCTG GGCGAGCAGC GCCACGAGGT GTTGCAGGTG
ATGGATGATC TGCGCTCGGC CGAAGTCGAT TTTCTGACGA TCGGGCAGTA TCTGCAGCCG
ACCAAGAAAC ACCACGCCGT GATGGCCTAT GTCACGCCGG AGGAGTTTTC CAACTACGAG
ACCGTTGCCT ACACCAAGGG CTTCCTGATG GTGTCGGCGA GTCCGCTCAC GCGCTCGTCG
CATCATGCCG GCGAGGACTT CGCCAAGCTG AAGGCCGCGC GCGACGCGCT CGCGCGCTGA
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| Protein sequence | MVTIVDTLSN TPLRPRHPEK ANRPDSISPA KPSWIRVKAP TTRGYADTRN IVRENGLVTV
CEEAGCPNIG ECWDKKHATF MIMGDTCTRA CAFCNVKTGL PAALDAGEPE HVAEATFKLG
LAHVVVTSVD RDDLADGGAA HIAATIRAIR ATCPTTTIEV LTPDFLRKDG ALEQVVAAKP
DVFNHNLETV PSRYLSVRPG ARYFHSIRLL QRVKEIDPTI FTKSGIMVGL GEQRHEVLQV
MDDLRSAEVD FLTIGQYLQP TKKHHAVMAY VTPEEFSNYE TVAYTKGFLM VSASPLTRSS
HHAGEDFAKL KAARDALAR
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