Gene BBta_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3935 
Symbol 
ID5151113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4130151 
End bp4130891 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID640558768 
Producthypothetical protein 
Protein accessionYP_001239911 
Protein GI148255326 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACC AGCCCCACGA TCATCCGCCG CTCGCGGAAG CGCCACCCGA TTGCCCGCAC 
TGTCAGAAGC CGCTGCCGCT GTGCATCTGC GACAGCGTCA CGCCGCTGGA GAGCCGCTTG
GGACTGCTGA TCCTGCAGCA TCCGCAGGAG CAGGACCGTG CGCTCGGCAC AGCACGGCTC
GCCGCGCAGC ATTTCAAGAC CGCGGTGGTC AGGGTCGGGC TGTCCTGGCC GAGTCTCGCC
AAGGCGCTGG GCCGCCCCGT CGCAGACCCC GCGCGCTGGG CGATTCTTTA TCTCGGGTCG
GCCAAGGCGG CCGATCTCGA CCCCGACAGC GAGGTGCTGG CCCTCACGCG GAAGGGCGAG
GTCGCCGAGA ACCAGCGCGC GATCCTCAAA TCGATCGATG GCGTGATCCT GCTCGACGGC
ACCTGGAGCC AGGCCAAGGC GCTGTGGTGG CGGAATCCCT GGATGCTGAA ATGCCAGCGC
GTGATCCTCG GGCCGCGCCG GCCCTCGCGC TATGGACATC TGCGCCGGGA ACCGCGCCGC
GACGGGCTGT CGACCATCGA GGCGGCGGGC CTGCTGATGG CGGCGCTGGA ACGCCGACCG
GAGATCGCCG CGGCCCTCGA CGCCAGCTTC GAGCGCATGC TGGCGCGGTA TCAGGAGGTC
GAAAAAGAGC GTCCGGAGCT CACCCCGCGG CCCAAGCCCC GCGGCAAGCC GGATCGGCGC
GGCCGTAAAC GCCGGGTTTA G
 
Protein sequence
MSDQPHDHPP LAEAPPDCPH CQKPLPLCIC DSVTPLESRL GLLILQHPQE QDRALGTARL 
AAQHFKTAVV RVGLSWPSLA KALGRPVADP ARWAILYLGS AKAADLDPDS EVLALTRKGE
VAENQRAILK SIDGVILLDG TWSQAKALWW RNPWMLKCQR VILGPRRPSR YGHLRREPRR
DGLSTIEAAG LLMAALERRP EIAAALDASF ERMLARYQEV EKERPELTPR PKPRGKPDRR
GRKRRV