| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3932 |
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| Symbol | mdtA |
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| ID | 5151110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4122426 |
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| End bp | 4123847 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558765 |
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| Product | multidrug resistance protein mdtA precursor |
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| Protein accession | YP_001239908 |
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| Protein GI | 148255323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.416339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTTA AACCGGACGA GAAGGGAGCA GGAGCCGTGA AACGGGCGCG GGCCAGCGTG
GCCCGGCGGC TGGTGTCGAT CACGATCACG CTGCTGATCC TCGGCGGCCT TGGCTATATC
GGCTGGATGG CCATGCAGCA GAAGCAGCAG CAGGTCAACC GATTCGCCCG GCCCGACCTT
CCGGTGCCGG TGCTCGCGGC CTCGCCTGTC ATCAAGGACG TGCCGGTCTA TCTCGACGGC
GTCGGCGCGG TCCGCGCCCT GAACACGGTG ACGGTGCGAT CGCAGGTCGA CGGCAAGCTG
ATCGCCGTCA ACTTCGTCGA GGGGCAGGAC GTCAAGCAGG GCGATGTGCT CGCCGAGATC
GATCCGGCCA TCTATCAGGC CCAGTACGAT CAGGCCGTCG CCAAGAAGGC GCAGGACGAG
GCGCAGCTTG CCAACCAGAA GCTCGATCTC GCCCGTTACG AGCAACTCGC CGCCAGCAGC
GCCGGCTCCA AGCAGCAGGC CGATACGCAG CGCGCCGTCG TCGCGCAGCA GCAGGCGCTG
ATCAAGGCCG ACCAGGCGGC GATCGACAAT GCCGCGGCAA CGCTCAGCTA CACCAAGATC
GTGGCGCCGA TCTCGGGCCG GGCCGGTCTG CGCCAGGTCG ACCAGGGCAA CATCATCCGC
GCGTCGGACG CCACCGGCCT CGTCGTCATC ACCCAGCTGC AGCCGATCGC CGTGCAGTTC
AGCCTGCCGC AGCAGCAGAT CATGCGGGTC AATGCCGCGG CGGCGAAGGG ACAGCTCGCG
GTCGACGTGT TCGGCAATGA CGGCGTCACC GTGATTGATA CCGGCACCCT GCGGGGCATC
GACAACCAGG TCGATCAGAC CACCGGCACG CTGAAGCTGA AGGCAGAATT TCCAAACGCC
AGATTCCAGC TGTGGCCAGG CCAGTTCGTC AATGTGCGGC TCAAGGTCGA GACGCTGCCG
CAGGCGATCA CCGTGCCGAC ATCGGCCGTG CAGCGCGGGC CAGCCGGCAC GTTCAGCTAC
GTGATCGGCG AAGGCGAGGT CGCTTCGGCG CATCCGGTCA CGGTCGTGCA GCAGAACGAG
AGCGAGGCGG TGATCGCGAG CGGGCTCAGC CCATCCGACC GGGTGGTGAC GACCGGATTC
GCCAATCTCG CCGATGGCGT GAAGGTCGTG ATCGGGCGCG CCGAGCAGAC GCCGCAGGCC
GATCTTGCGC CGCGCAAGCG TGGCCGCAGC CCGCAAGCCA AGGATCAAAC CAAGGATCAA
ACCAAGGAAG GCGGCGCTGC GCCCGACGGC ACAGCCAAAG ACGGCGAGCA CAGGCGCAGG
CCGCAAGGCG ATGGCCAGAG CGGGCAGGCG GGCTCGGCCG GCGCGCCGCC GCCGCCTCAG
GCGGGTGGTG AGCAGGGACG TGGCGCGAGG CCGCAGCCAT GA
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| Protein sequence | MLFKPDEKGA GAVKRARASV ARRLVSITIT LLILGGLGYI GWMAMQQKQQ QVNRFARPDL
PVPVLAASPV IKDVPVYLDG VGAVRALNTV TVRSQVDGKL IAVNFVEGQD VKQGDVLAEI
DPAIYQAQYD QAVAKKAQDE AQLANQKLDL ARYEQLAASS AGSKQQADTQ RAVVAQQQAL
IKADQAAIDN AAATLSYTKI VAPISGRAGL RQVDQGNIIR ASDATGLVVI TQLQPIAVQF
SLPQQQIMRV NAAAAKGQLA VDVFGNDGVT VIDTGTLRGI DNQVDQTTGT LKLKAEFPNA
RFQLWPGQFV NVRLKVETLP QAITVPTSAV QRGPAGTFSY VIGEGEVASA HPVTVVQQNE
SEAVIASGLS PSDRVVTTGF ANLADGVKVV IGRAEQTPQA DLAPRKRGRS PQAKDQTKDQ
TKEGGAAPDG TAKDGEHRRR PQGDGQSGQA GSAGAPPPPQ AGGEQGRGAR PQP
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