| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3925 |
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| Symbol | |
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| ID | 5149906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4113605 |
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| End bp | 4115125 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558758 |
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| Product | putative amino acid ABC transport, permease protein |
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| Protein accession | YP_001239901 |
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| Protein GI | 148255316 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.132746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.552151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TCACAGCCTC CACCTTCATT CGCCAGGACA TGGCCGGCGA ACGTCCGGCA
CCGGTCAAGA CCACGGGGTT CACGGGCTTC GTCCGCACCC GGCTGTTGAA TTCGCCGACC
AACATTCTGC TCACTTTGGT GAGCGCCTTG TTGATCTGGT TCACGGTGAT CCCGGCGCTC
AAGTTCCTGC TGGTGGATGC CGTCTGGGTC GGCAAGGATC GCGAGGCGTG TCTTGAGCAG
AACGTCGGCC ATGCCGTCGG CGCGTGCTGG CCCTATGTCA CCGCGAAATT CGGCCAGTTC
ATGTACGGGT TCTATCCCGA CGCCGAGCGC TGGCGGGTCA ACCTGACCTA TGGGCTGGCC
GTGGTGCTGC TGGTACCGCT GTTGATCCCG CGCCTGCCGG CCAAGGGGCT CAACGCCGGC
CTGTTCTTTT TCGCGCTTCC GGTGGTCGCA TTCTTCCTGC TCTATGGCGG GGGATTGTCG
GGCTTCGGCG TGAGCTGGAC CGCGGCCACG CTGCAACTGT TCGCGGAGAG CGTCGACACC
GCCGGCAACG CCCTGGTTCG CGGCGGTGCC AACCTGCCGG TCGTCGGCAT GCTGATGTGG
CTGCTCGGCA AGCTCGTCGT TCTGATCGGC ATGCTGGCGT CGCTGCTGAT CTGGCCACTG
GTCTGGGTTC GCGATCAGCT GCAGGCCTCG CATCAGCCGG TCTGGACCGA TCTCGCTTTG
ACCGCCATCG TGGTCACGGC GCTGGTGTTC GTCATCGGCG GCGGCAGCAG GGCGCTGCGC
AGCGTGGTCG CCACCGCCGC GACCTTCGCC GGCATCGCTC TCGTCATCGC CATCATGGGC
CTCGATCGCG GCGGACTTCC GATCGTCGAC ACCCGGCTCT GGGGCGGCAT GCTAGTCACC
CTGGTCGTCT CGGTGATCGG CATCGTCGCC TCGATGCCGA TCGGCATCGC GCTGGCGCTC
GGCCGCCGTT CGACGATCCC GTTGATCCGG CTGTTCTCGA TCGCCTTCAT CGAGCTCGTG
CGCGGCGTGC CGCTGATTAC GGTGCTGTTC TTCGCCACCT ACATGCTGCC GCTGTTCCTG
CCCGGCAACA TGCGCATCGA TGGACTGGTG CGGGCGCTGG TCGGCGTGGC GCTGTTTTCC
GGGGCCTACA TGGCGGAGGT GATCCGCGGC GGCCTGCAGG CGATTCCGCG GGGGCAGGCG
GAGGCGGCGA GCGCGCTCGG CCTGTCCTGG TGGAAGACGA CGAGCTTCAT CGTGCTGCCG
CAGGCGCTGC GCCACGTCAT TCCGGGCATC GTCAACAGCT TCATCTCGCT GTTCAAGGAC
ACCTCGCTGG TGTCGATCGT GGCGCTGTTC GACCTGCTCG GCAGCCTCAA GGCATCGTTC
GCCGATCCGG TCTGGGCGAC GCCGACCACC GCGTTCACGG GGTTCGCCTT CACCGGGCTG
ATCTACTTCG TCTTCTGCTT CGGCATGTCA CGCTACTCCC TGCTGGTCGA GCGCCGCCTG
AACGCGCACC GGCGTCATTG A
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| Protein sequence | MTDITASTFI RQDMAGERPA PVKTTGFTGF VRTRLLNSPT NILLTLVSAL LIWFTVIPAL
KFLLVDAVWV GKDREACLEQ NVGHAVGACW PYVTAKFGQF MYGFYPDAER WRVNLTYGLA
VVLLVPLLIP RLPAKGLNAG LFFFALPVVA FFLLYGGGLS GFGVSWTAAT LQLFAESVDT
AGNALVRGGA NLPVVGMLMW LLGKLVVLIG MLASLLIWPL VWVRDQLQAS HQPVWTDLAL
TAIVVTALVF VIGGGSRALR SVVATAATFA GIALVIAIMG LDRGGLPIVD TRLWGGMLVT
LVVSVIGIVA SMPIGIALAL GRRSTIPLIR LFSIAFIELV RGVPLITVLF FATYMLPLFL
PGNMRIDGLV RALVGVALFS GAYMAEVIRG GLQAIPRGQA EAASALGLSW WKTTSFIVLP
QALRHVIPGI VNSFISLFKD TSLVSIVALF DLLGSLKASF ADPVWATPTT AFTGFAFTGL
IYFVFCFGMS RYSLLVERRL NAHRRH
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