| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3923 |
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| Symbol | |
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| ID | 5150546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 4111341 |
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| End bp | 4112357 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640558756 |
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| Product | putative amino-acid ABC transporter, substrate-binding protein |
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| Protein accession | YP_001239899 |
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| Protein GI | 148255314 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG TCACTCTGGC TCTTACTTTT GCTCTTGCCC CGATCCTGGC GAGCGTCGGC
GCTCAGGCCG ACACGCTCAA GACCGTCAAG GATCGCGGCA TGCTCGCCTG CGGCGTCAGC
CAGGGCCTCC CTGGCTTCTC GTCGCCGGAC GACAAGGGCA ATTGGACCGG GATCGACGTC
GACGTCTGCC GCGCTGTCGC TGCCGCGATC TTCAACGATC CGACCAAGAT CAAGTTCGTG
CCGCTGTCCG CAAAGGACCG CTTTACCGCG CTGCAATCGG GCGAGATCGA CGTGCTGTCC
CGCAACACGA CCTGGACCTT GTCGCGCGAC ACCTCGCTCG GAGCGAATTT CGCCGGCGTC
ACCTATTATG ATGGCCAGGG CTTCATGGTG AAGAAGGCGC TGAAGGTCAA TTCCGCGCTC
GAGCTGAACA GTGCCTCTGT CTGCGTGCAG ACCGGCACCA CCACCGAACA GAACCTCGCC
GACTACTTCA AGGCCAACAA GATGAAGTAC GAGGTGATCG CGTTCGCCGG TGCCGACGAG
ACGGTGAAGG CTTATGAGTC CGGGCGCTGC GACGTGTACA CGACGGACGT CTCGGGCCTC
TATGCCGAGC GTTTGAAGCT TGCCAACCCG GCGGACCACG TCGTGTTGCC GGAGGTGATC
TCGAAGGAGC CGCTCGGACC GATGGTCCGT CACGGTGACG ATCAGTGGTT CGATATCGTC
AAATGGACCT TGTTTGCGCT GGTCACCGCC GAGGAACTCG GCGTCACGCA GGCGAACGTC
GACGAGATGG CCAAGTCGGA CAAGCCCGAG TTCAAGCGCG CCTTTGGCAC CGATGGCAAT
CTCGGTGAGC AGCTCGGCCT CACCAAGGAC TGGTTCTCCC GGATCGTGAA GGCGGTCGGC
AATTATGGCG AGGTGTACGA GCGCAATGTC GGTGCCGGCT CCAAGCTGCA GATCGCCCGC
GGACTGAACC AGCTGTGGAA CAAGGGCGGT CTGCAATACG CGCCGCCGAT CCGCTGA
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| Protein sequence | MKRVTLALTF ALAPILASVG AQADTLKTVK DRGMLACGVS QGLPGFSSPD DKGNWTGIDV
DVCRAVAAAI FNDPTKIKFV PLSAKDRFTA LQSGEIDVLS RNTTWTLSRD TSLGANFAGV
TYYDGQGFMV KKALKVNSAL ELNSASVCVQ TGTTTEQNLA DYFKANKMKY EVIAFAGADE
TVKAYESGRC DVYTTDVSGL YAERLKLANP ADHVVLPEVI SKEPLGPMVR HGDDQWFDIV
KWTLFALVTA EELGVTQANV DEMAKSDKPE FKRAFGTDGN LGEQLGLTKD WFSRIVKAVG
NYGEVYERNV GAGSKLQIAR GLNQLWNKGG LQYAPPIR
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