| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3922 |
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| Symbol | metC |
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| ID | 5150545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 4109831 |
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| End bp | 4111024 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558755 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001239898 |
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| Protein GI | 148255313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.380432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.700779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA AGAACGACCC CGCTGCGGCG GTGCGACAAA ATGTCGGAAC ACGGCTGATC
ACGGCGGGCA GAGACACGAA GGCGCAGCAT GGATTCGTGA ATCCTGCCGT CTTCCACGGC
TCGACCGTTC TTTACCCCAC AGCCGACGAC CTGCACGCGC ACCGCGGCGA ATTCCAATAT
GGCCGCCACG GAACACCGAC CACCAAGGCG CTGCAGCAGG TGCTGATGGA GCTGGAAGGC
CCGCAATGCG CCGGCGTCGG CATCGCGCCG TCCGGTCTTG CTGCGATCTC GACGACGCTG
CTGTCGGTGC TCAAGGCCGG CGACCACGTG CTCGTCTGCG ACAGCATCTA CCGTCCTACC
CGCAATTTCT GCAACGGCAT GCTGGCCCGT TATGGTGTCG AGACGACTTA TTTCGACCCA
CTTGTCGGCT CAGGAATTGA GCAACTGCTC AAACCGAATA CACGGGCAGT CGTCGTCGAG
GCGCCGGGCT CGCAGTCCTT CGAGATGCCG GACATCCCGG CGATCGCGGC CGTGGCGCAT
GCCCATGGCG CGCTCGTCAT CGACGACAAC ACCTGGGCCA CGCCGCTCTA TCACCGCTCG
CTTGAGCAGG GCGTCGACAT CAGCATGCAG GCGGCCACCA AATATATCGG TGGCCATTCC
GACATCATGT TCGGAACGAT TTCGGCAAAC GAGAAGGCCT GGCCGTTGAT TGCCGAGGGC
ATCCGCTTGC TCGGCGTCTG TGCCGGCCCC GACGATGTGT TCCTGGCGTT GCGCGGCGTT
CGGACGCTTG GCGTGCGGCT GGCCCAGCAT CATCGGTCGG GCCTGGAGAT GGCGCGCTGG
CTCGCCGCGC GTCCCGAGGT GATCGACGTG CTGCATCCGG CGCTGGAGAG CCATCCGGGA
CATGCGATCT GGAAGCGCGA CTTCACCGGC GCCTCGGGCC TGTTCAGCAT CGTGCTGCAA
CCAAGGCCGC AAGCGGCGGT TGATGCGATG CTCGACACGC TGACGCTGTT CGGCATGGGC
TATTCCTGGG GTGGCTTCGA GAGTCTGGCG ATCCCGTTCG ACTGCGCGAG CTATCGGACT
GCCACCCGCT GGGCGCCGGG CGGCCCGACT TTGCGCCTGC ATATCGGCCT GGAGAACGTC
GAGGATCTCA AGGCTGACCT GGAACGCGGC TTTGCGGCCT TCAACGCCGC CTGA
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| Protein sequence | MASKNDPAAA VRQNVGTRLI TAGRDTKAQH GFVNPAVFHG STVLYPTADD LHAHRGEFQY
GRHGTPTTKA LQQVLMELEG PQCAGVGIAP SGLAAISTTL LSVLKAGDHV LVCDSIYRPT
RNFCNGMLAR YGVETTYFDP LVGSGIEQLL KPNTRAVVVE APGSQSFEMP DIPAIAAVAH
AHGALVIDDN TWATPLYHRS LEQGVDISMQ AATKYIGGHS DIMFGTISAN EKAWPLIAEG
IRLLGVCAGP DDVFLALRGV RTLGVRLAQH HRSGLEMARW LAARPEVIDV LHPALESHPG
HAIWKRDFTG ASGLFSIVLQ PRPQAAVDAM LDTLTLFGMG YSWGGFESLA IPFDCASYRT
ATRWAPGGPT LRLHIGLENV EDLKADLERG FAAFNAA
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