| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3900 |
|---|
| Symbol | |
|---|
| ID | 5149186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4083258 |
|---|
| End bp | 4083635 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640558733 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239877 |
|---|
| Protein GI | 148255292 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.333239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG ACACGTCCAT GTTGGACCAG CGCGAATATG GCAATCTGAT CGGGAGTGAC
AAGGTCGAAG GCACCGCCGT CTATGGCGCT GATGACAGCA AGATTGGCAC GATCGAACGC
GTGATGATCG ACAAGCTGAG CGGCCGGGTG TCGTATGTTG TGTTGGCTTT TGGCGGCCTT
CTCGGCTTGG GCAACGACCA TTATCCGCTA CCCTGGCAAT CGCTGAAGTA TGACACCCGT
CTTGGCGGCT ATGTGACGGG CGTGACCGAG GAGCAGCTTC GTGGTGCGCC GAAATATTCC
GACGAGCGCG AATGGGACTG GGGCGACCTC GCGACAGGTC GCAAGGTGGA CGATTATTAC
GGGATCAAAC TCGCTTAG
|
|---|
| Protein sequence | MTLDTSMLDQ REYGNLIGSD KVEGTAVYGA DDSKIGTIER VMIDKLSGRV SYVVLAFGGL
LGLGNDHYPL PWQSLKYDTR LGGYVTGVTE EQLRGAPKYS DEREWDWGDL ATGRKVDDYY
GIKLA
|
|---|
| |