Gene BBta_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3882 
Symbol 
ID5149153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4068745 
End bp4069296 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640558718 
Producthypothetical protein 
Protein accessionYP_001239862 
Protein GI148255277 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.391331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA GAGCCACCAG CCAGTTTGAC CTGTGGCTGA AAACCTTAGC TTTCCTGCTG 
CTTATCGGGC TGTCCTCGCC TGTGGTGTCA GCGTACGCCG CCGACGAGCC GGATCTGATC
TTCCGTCGGT CGACTGTGTT CAAATTGCTC AGCCCGAATG ACAAGCTTGC GACCTATGGC
GTTGACGATC CTGAGGTCGA GGGCGTCGCC TGCCATTTCA CCGTGCCCCA GAAGGGGGGA
TATGCCGGCT GGCTCGGTCT TGCGGAGGAG GTGTCCGACA TTTCGCTCGC ATGCCGGCAA
ATCGGGCCGA TCCGCTTCAA GCGCAAGCTC GAACAGGCCG ACGACATGTT TCGGCAGCGG
AGGTCGCTGT TCTTCAAGAA GATGCAGATC GTGCGCGGCT GCGACGCCAA GCGCAACGTT
CTCGTCTACA TGGTCTATTC GGACAAATTG ATCGAAGGCT CGCCGAAGAA CTCGACCTCG
TCGGTGCCGG TCATGCCCTG GGGCAAGGCG ATTGATGGCG ATGTGCAGAA ATGCGGAGAC
TTCATTCAAT AA
 
Protein sequence
MSFRATSQFD LWLKTLAFLL LIGLSSPVVS AYAADEPDLI FRRSTVFKLL SPNDKLATYG 
VDDPEVEGVA CHFTVPQKGG YAGWLGLAEE VSDISLACRQ IGPIRFKRKL EQADDMFRQR
RSLFFKKMQI VRGCDAKRNV LVYMVYSDKL IEGSPKNSTS SVPVMPWGKA IDGDVQKCGD
FIQ