Gene BBta_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3880 
Symbol 
ID5149151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4066071 
End bp4066646 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID640558716 
Productputative glutathione peroxidase 
Protein accessionYP_001239860 
Protein GI148255275 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.41902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC GCAGGACGGT TCTCTTCGGC ATCGGCGCGT CCATGGCCGG CTCAGCGTTC 
ATTTCGCCGG CAGCCCGCGC CGAGAATGCG GTGAGCAAGA CCACAGCCTA TCGCTTCTCG
TTCCCGGCGC TGTCGGGTGA CCCGATTCGC CTGGCCGAGT TCACGGGCAA GCCGGTCCTG
GTCGTGAATA CGGCCTCGCA ATGCGGCTAT ACCCCGCAAT ACACCGGCCT GCAGCAGCTG
TGGAGCGAGT TCCACGAGCG CGGCTTGTCG ATCATTGCCG TGCCGTCGAA CGACTTCAAT
CAGGAGCCGG GAGTGGCCGG CGACATTGCC GAGCTCGCCA ACAAGCAGTT TGGCGTCACC
TTTCCGATGA CCGCAAAGGC GGTTGTCACC GGATCCAACG CCCATCCCTT CTACCGCTGG
GCGGCCGAGG CGCGGCCGAA GGACACCCCG CGCTGGAACT TTCACAAATA TCTGATCGGC
CGCGACGGCT ACATTGCCGA CGTGTTCGCA TCCTCGGTCG AGCCGACGGA TACCCGGGTG
AAGACGGCCA TCGCCCGCAA CCTCGCGGAC GGCTGA
 
Protein sequence
MIDRRTVLFG IGASMAGSAF ISPAARAENA VSKTTAYRFS FPALSGDPIR LAEFTGKPVL 
VVNTASQCGY TPQYTGLQQL WSEFHERGLS IIAVPSNDFN QEPGVAGDIA ELANKQFGVT
FPMTAKAVVT GSNAHPFYRW AAEARPKDTP RWNFHKYLIG RDGYIADVFA SSVEPTDTRV
KTAIARNLAD G