Gene BBta_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3872 
Symbol 
ID5148832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4057218 
End bp4057640 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID640558709 
Producthypothetical protein 
Protein accessionYP_001239853 
Protein GI148255268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.281546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.383946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG CTTACATGCT CGAGATTACT TTGGAAGACC CGGCTTCAGC CGCGGCAGAA 
ATGCTGATAG CTGAGCTGTC TGCGACGCTC GCGCGCATCA CCGGTGACAG CGGCCGCTCG
TCGTTCGATC CGGGTGACGT CCGCGGCCCG AAGGCGTGCT TTGTCGTTGC GCGCGATGGA
GAGGGGCAGG CCATCGGTTG TGGCGGGCTG CGGCCGCTGG AGGCGAACAT TGCCGAAGTG
AAACGGATGT ACGCGCGGCG TCGGTGCAGC GATCCTGAAG CATCTCGAAG CGGCAGCGCT
CGGCTTCGGC TACCACGCGA TCTGGCTGGA GACGCGGCGC GTCAATGCGC GTGCCGTCGC
ATTCTACGAG CGGCACGGCT ATCGGCGGAT TCCCAATTTC GGCAAATATG CCGGCCGGCC
TGA
 
Protein sequence
MSRAYMLEIT LEDPASAAAE MLIAELSATL ARITGDSGRS SFDPGDVRGP KACFVVARDG 
EGQAIGCGGL RPLEANIAEV KRMYARRRCS DPEASRSGSA RLRLPRDLAG DAARQCACRR
ILRAARLSAD SQFRQICRPA