Gene BBta_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3838 
Symbolndk 
ID5150372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4023622 
End bp4024044 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content64% 
IMG OID640558676 
Productnucleoside diphosphate kinase 
Protein accessionYP_001239820 
Protein GI148255235 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.502354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTG AGCGCACGTT TTCGATCATC AAGCCCGACG CGACCGAGCG TAACCTGACC 
GGCGCGATCA ACGCGCTGAT CGAGAAGGCC GGTCTGCGCA TCGTGGCCCA GAAGCGCATC
CGCATGACCC GCGAGCAGGC CGAGACCTTC TATGCCGTGC ACAAGGCCCG CCCGTTCTTC
GGCGAACTGG TCGACTTCAT GATCTCCGGC CCGGTCGTGG TCCAGGTTCT GGAAGGCGAG
GGCGCCATCC TCAAGTACCG TGACGTCATG GGCGCGACCG ATCCGTCCAA GGCCGCCGAT
GGCACCATCC GCAAGCTGCA CGCCAAGTCG ATCGGCGAAA ACTCGGTGCA CGGATCGGAC
GCCGCGGAAA CCGCGGCCAT CGAGATCGCG CAGTTCTTCT CCGGCAACGA GATCGTCGGC
TGA
 
Protein sequence
MAIERTFSII KPDATERNLT GAINALIEKA GLRIVAQKRI RMTREQAETF YAVHKARPFF 
GELVDFMISG PVVVQVLEGE GAILKYRDVM GATDPSKAAD GTIRKLHAKS IGENSVHGSD
AAETAAIEIA QFFSGNEIVG