Gene BBta_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3828 
Symbol 
ID5152262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4011658 
End bp4012596 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID640558666 
Producthypothetical protein 
Protein accessionYP_001239810 
Protein GI148255225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.068458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0535848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG CGTTCTCTTC CCGCCTTCGG GCCCTGGCCA TCTGCAGTCT TGCGGTGCTG 
GCATCGGGTG CCGGGCTGAT CCCCGCTCAG GCCCAGAGCA TCGTCGTGAT GGTGAATGGT
GATCCCATCA CCGATTACGA CATTGAGCAG CGGATGAAGC TCAACTTCCT CAGCACGCGA
AAGCAGCAGA GCCGGCAGGA GGTCATCAAC GAGCTGATCG ACGACAAGGT GAAGATCAAG
GAAGGCAAGA AGTTCGGCGT CGAACCGACG GCCTCCGACG TCGACCAGTC GTTCGCCGGC
ATGGGCTCGC GCATGCGGCT CAATGCCGAA CAGCTGACGA AATCGCTGGA GAGCCAGGGC
GTGCGCCCTG AGACGCTCAA GGCGCGCATC AAGGCCGAGA TCGTCTGGAC CAGCCTGGTC
CGCGGCCGCT ACAAGGAACG CCTGCTGGTG TCCGACAAGG ACGTTGCCGC GGCGGTTGCT
GCGGCCGGCG GCGATTCCGA CCAGCAGGGC CAGGCCTTCG AATACAAGAT GCAGCCGATC
GTGCTGATCG TTTCAAACTC ATCGAACCAG GCGGTGATGG AAGCGCGGCA CAAGGAGGCG
GAAGCCCTGC GCGCGCGGGT GCAGACCTGC GCCGACGCCA ACAATGTCTT CAAGACCACC
GCGAACGCCG TGATCAAGGA AATCGTCGTC AAGACGTCCG CCGACATTCC GCCGAACCTC
CGCAAATTGC TCGACGACAC CCCGATCGGA CATCTCACGC CGCCCGAAGC GACCAAGCAG
GGAATCCAGA TGGTCGCGCT GTGCGCCCGC ACCCCGACGA CGGTCGACAC GCCGAAAAAG
CGTCAGATCC GCGAGGAGAT GTACACCAAG AAATACGAGG CGACGTCCAA GGCCTATCTG
CAGGAAGTCC GCAAGGCGGC GATGATCGAA TATCGCTGA
 
Protein sequence
MTIAFSSRLR ALAICSLAVL ASGAGLIPAQ AQSIVVMVNG DPITDYDIEQ RMKLNFLSTR 
KQQSRQEVIN ELIDDKVKIK EGKKFGVEPT ASDVDQSFAG MGSRMRLNAE QLTKSLESQG
VRPETLKARI KAEIVWTSLV RGRYKERLLV SDKDVAAAVA AAGGDSDQQG QAFEYKMQPI
VLIVSNSSNQ AVMEARHKEA EALRARVQTC ADANNVFKTT ANAVIKEIVV KTSADIPPNL
RKLLDDTPIG HLTPPEATKQ GIQMVALCAR TPTTVDTPKK RQIREEMYTK KYEATSKAYL
QEVRKAAMIE YR