Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3826 |
Symbol | ksgA |
ID | 5152260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4009800 |
End bp | 4010660 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640558664 |
Product | dimethyladenosine transferase |
Protein accession | YP_001239808 |
Protein GI | 148255223 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0535848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA TCGACGACCT GCCGCCCCTG CGCGAGGTCA TTCGCGAGCA TCAGCTGTCG GCGCGCAAGG CACTCGGCCA GAACTTCCTG CTCGATCTCA ATCTCACCGC GCGAATTGCC CGGGCCGCCG GCCCGCTGGA GGACGCCACT GTGGTCGAGA TCGGTCCGGG CCCGGGCGGC CTGACGCGGG CGCTGCTCGC GCTCGGCGCC CGCCACGTCA TCGCCGTCGA GCACGATGAG CGCGCGATCC CGGCGCTGCA GGCGATCGCG GAGCGTTATC CGGGACGGCT CGAGATCGTC TGCACCGATG CCCGCACCTT CGACGTCCGG CCCTATCTCG GCAGCACCAA GGCCAAGATC GTCGCCAACC TGCCCTACAA CATCGCGACG CATCTGCTGA TCGGCTGGCT CTCGGCCGAA CCATGGCCGC CCTGGTACGA CATGATGGTG CTGATGTTCC AGCGCGAGGT CGCCGAGCGG ATCGTCGCGC GCGAGAACGA GGAAGCCTAT GGCCGGCTCG GCGTGCTCGC CAATTGGCGC TGCGAGACCA AGATCCTGTT CGACATCTCG CCCTCGGCCT TCGTGCCGCC GCCGAAGGTG ACCTCATCGG TGGTGCGGCT GGTGCCGCGC ACGGCCCCGG AGCCGTGCGA CCGCCGCGCG CTCGAGCAGG TCGCCGCCGC CGCGTTCGGC CAGCGCCGCA AGATGCTGCG CCAGAGCCTG AAGTCGCTGC CGACGGATCC CGCGCGGCTG GCCGCAGCGG CCGGCGTCGA TCCGACGCGC CGCGCCGAGA CCATTCCGGT GTCGGGCTTT GTTGCCATGG CGCGCGAATT GACCAATAGT CGCGACGATA ACAAGACCTA A
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Protein sequence | MSAIDDLPPL REVIREHQLS ARKALGQNFL LDLNLTARIA RAAGPLEDAT VVEIGPGPGG LTRALLALGA RHVIAVEHDE RAIPALQAIA ERYPGRLEIV CTDARTFDVR PYLGSTKAKI VANLPYNIAT HLLIGWLSAE PWPPWYDMMV LMFQREVAER IVARENEEAY GRLGVLANWR CETKILFDIS PSAFVPPPKV TSSVVRLVPR TAPEPCDRRA LEQVAAAAFG QRRKMLRQSL KSLPTDPARL AAAAGVDPTR RAETIPVSGF VAMARELTNS RDDNKT
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