Gene BBta_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3825 
Symbol 
ID5152259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4008715 
End bp4009773 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID640558663 
Productzinc-containing alcohol dehydrogenase family protein 
Protein accessionYP_001239807 
Protein GI148255222 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0588296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA TGCGTCGTCA GTCGCTCGTC AAATTCGATG CACCGCTGTG CGAGACGATC 
GTCGAGACAC CGAAGCCGCA GGGCCGGGAA GTTCTCGTGC GCATCGAACG CTGCGGCCTG
TGCCATTCCG ACCTGCACAT CCAGGACGGC TATGCCGACC TCGGCGGCGG CAAGCGCCTC
GACACGACCC GCGGCATGAC CCTGCCGTTT ACGCTCGGAC ATGAGATCGC CGGTGTCGTC
GACGAGATCG GACCCGCCGT GCCGAGGGAA CTGATCGGCG CCCGGCGCGC CGTGTTTCCA
TGGATCGGCT GCGGCCAGTG CCGCGACTGT GCCAATGGCG ACGAGAATTT GTGCGCCAAG
CAGCGTTTCC TCGGAGTCTC GATCGACGGT GGCTTCGCCA CCCACGTGCT GGTGCCGGAC
GCGAAGTACC TGCTCGAATA TGATCCGCTG CCGGTCAATC AGGCGGCGAC CCTGATGTGC
TCCGGTGTCA CGGCCTATGG CGCGCTCAAG CGTCTCGTCG ACCGGCCGCG GCAGCGCAAT
TTGCTGCTGA TCGGACTCGG CGGCGTCGGC ATGATGGGAC TGTCGTTCGC GCAGGCGATG
TTCAAGCAGC CGATCTCGGT CGCCGATCTC TCGGCTGCCG CGCGCGACAC CGCGCTGAAG
AACGGGGCGG CCACAGCCTA TGATCCGGCC GAGCCGGACG TGATCAAGCG CATCCTCAAG
GAGACCGAGG GCGGCTTCGA CGAGGTCGTC GACTTCGCCG GCAATGAGAA GTCGATGGCG
TTTGCCGTGT CGGTCGTGGC TCGCGGCGGC AAGATCGTCG TGTCCGGCCT GATGGGCGGC
CAGTTCACCT TGCCGATGGT GCAGTGGGTG TACAAGCGCA TGACCATCGA GGGCTTCATG
GTCGGCACGC TCGCCGAAGG TCATGAGCTG ATGGCCCTGG CCCGCGCCGG CAAGATCAAG
CCGCCGCCGA TGCGCGAGGC GCCGATGGCC GACGTGCAGA AGTGGATCGA TGAGCTCCGT
GCTGGCCATG TCGTCGGACG CGTGGTGCTG ACCAACTGA
 
Protein sequence
MALMRRQSLV KFDAPLCETI VETPKPQGRE VLVRIERCGL CHSDLHIQDG YADLGGGKRL 
DTTRGMTLPF TLGHEIAGVV DEIGPAVPRE LIGARRAVFP WIGCGQCRDC ANGDENLCAK
QRFLGVSIDG GFATHVLVPD AKYLLEYDPL PVNQAATLMC SGVTAYGALK RLVDRPRQRN
LLLIGLGGVG MMGLSFAQAM FKQPISVADL SAAARDTALK NGAATAYDPA EPDVIKRILK
ETEGGFDEVV DFAGNEKSMA FAVSVVARGG KIVVSGLMGG QFTLPMVQWV YKRMTIEGFM
VGTLAEGHEL MALARAGKIK PPPMREAPMA DVQKWIDELR AGHVVGRVVL TN