| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3822 |
|---|
| Symbol | |
|---|
| ID | 5156275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4004447 |
|---|
| End bp | 4005334 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640558660 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239804 |
|---|
| Protein GI | 148255219 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.169927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGT CGAGCATGAC CGGCTTTGCC CGTAGCCACG GGGCAAGCGG TCCCTACTCG
TTCGAGTGGG AGTTGAAGTC CGTCAACGCC AAGGGACTGG ACGTCCGCGT GCGGCTGCCG
CAGGGCTGGG ACGAGGTCGA GGCTTTCGCC AAGAAGCGCG CAACCGAAGT GCTGTCCCGC
GGCACTGTCT ACGCAAACCT GACCGTCAAG CGCACCGAGA CTGGCGCGAC GGTTCGCATC
AACGAGGACG TTCTGGCGGC CGTGGTCAAG GTGGCGAGCT CGCTGTCGGG TCGGATCGAC
GCGGTCGCCC CGAGTATCGA CGGGCTGCTG TCGATCAAGG GTGTGATCGA GGTGGCCGAG
CCGGAGAGCG ATGAGGCCGA GGACAAGGCC GCCAAGGAAG CTGCCATCGC CGCTTTCGAG
ACGGCGCTGA AGCATCTGGT GGAGATGCGT CGCCGCGAGG GAGAATCGCT CGGCCAGATT
CTCAATCAGC GTGTCGACGA GATCGAGGCG CTGGCGGGCA GGGCGGAAGC CTCACCCGGA
CGCAAGCCGG AAGCGATCAA GGCGCGGCTC GCGGAGCAGG TCGCGGCCTT GCTCGAAACC
TCCGATCGTT TCGATCCGGA CCGCCTGGCG CAAGAGGCGC TGCTGATCGC GGCCAAGGCC
GACGTCCGCG AGGAGCTCGA TCGTATCGCC TCGCATGTCG CGCAGGCCCG CGAGATGCTC
GGCAAGGGCG GGCCGGTCGG GCGCCGGCTC GATTTCCTCG CGCAGGAATT CCACCGCGAG
GTCAACACCT GCTGCTCGAA GTCGAACGAC ATCGAGCTGA CCAACACGGG ACTCGAGCTG
AAGACCGTGG TCGAGCAGTT TCGCGAACAG GTTCAGAATC TGGAGTGA
|
|---|
| Protein sequence | MALSSMTGFA RSHGASGPYS FEWELKSVNA KGLDVRVRLP QGWDEVEAFA KKRATEVLSR
GTVYANLTVK RTETGATVRI NEDVLAAVVK VASSLSGRID AVAPSIDGLL SIKGVIEVAE
PESDEAEDKA AKEAAIAAFE TALKHLVEMR RREGESLGQI LNQRVDEIEA LAGRAEASPG
RKPEAIKARL AEQVAALLET SDRFDPDRLA QEALLIAAKA DVREELDRIA SHVAQAREML
GKGGPVGRRL DFLAQEFHRE VNTCCSKSND IELTNTGLEL KTVVEQFREQ VQNLE
|
|---|
| |