Gene BBta_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3804 
Symbol 
ID5155882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3983861 
End bp3984427 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID640558643 
Producthypothetical protein 
Protein accessionYP_001239787 
Protein GI148255202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0689439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.705578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC CGCAGATCCC GCATCCGATC GTCTCGACGC CCCGCCTGCG GCTGCGGCAG 
TTTCGTGAGG ACGACACCGC CGCCATGCAC CGCTGCTTCA GCGACAGGGA CGCGATGCGG
TTCTGGGATC ATCAGGTGCA TACCAAGCCG AGCGAGAGCG AGCGCGCCGT TCGCCGCTTC
ATCGATTGCA CCCCGTCCTA TTATCGGTTC TGGGCGGTCG CCGAGGCCGG AACCGACCGC
TGCATCGGTA TGGTCAACTA TCACGACGGT CACATGCGCC AACGGCGCGT CACGATCGGC
TACATCGTCG ATCCCGCGCG ACACCGTCAG GGGATCGCGG CCGAGGCGGT CGCGGCGATG
CTCGACTACT GCTTCGACGA GCTCGGCCTG CACCGTCTGC AAGCCTTCAT CCACCCCGAC
AATCTCGCCT CGCGCCGGCT GGTCGAGAAG CTCGGCTTCC GCTGCGAGGG CCAGCTGCGC
GACCATCTGC GCGTCGGCGG CGAATGGCGC GACGACATGA TGTATGCGCT GCTCGCGACG
GATCCACGTG GCAGAGCGGC CCCATGA
 
Protein sequence
MAKPQIPHPI VSTPRLRLRQ FREDDTAAMH RCFSDRDAMR FWDHQVHTKP SESERAVRRF 
IDCTPSYYRF WAVAEAGTDR CIGMVNYHDG HMRQRRVTIG YIVDPARHRQ GIAAEAVAAM
LDYCFDELGL HRLQAFIHPD NLASRRLVEK LGFRCEGQLR DHLRVGGEWR DDMMYALLAT
DPRGRAAP