Gene BBta_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3799 
Symbol 
ID5149701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3979040 
End bp3979810 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID640558638 
Productexodeoxyribonuclease III 
Protein accessionYP_001239782 
Protein GI148255197 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.602523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG CAACCTTCAA CATCAACAAT GTCAGGCGGC GCCTCCCCAA TTTGCTCTCC 
TGGCTGCGCA GCGCCAGGCC CGACATCGTC TGCCTGCAGG AGCTGAAATG CGCCCAGGCC
GAATTCCCGG CTGACGCCAT CGCAACGGCC GGCTACGGCG CGGTGTGGCA GGGTCAGAAG
ACCTGGAACG GGGTTGCGAT CCTCGCGCGC AAAGCAGAGC CGGTACTGAT CCGCACTGCC
CTGCCCGGCG CGCCTGCGGA CAAGGAAGCG CGCTACATCG AGGCCGCCGT GCGCGGCATC
GTGATCGGCT GTCTGTATCT GCCGAACGGC AATCCGCAGC CGGGTCCGAA ATTCGACTAC
AAGCTCGCCT GGTTCAAGCG GCTGCACAGG CACGCGGCTG ATTTCATCGA GCATGACCTG
CCGGTCGTGC TCGCCGGCGA CTACAATGTC GCGCCGACGC CGCTGGATAT CTATCCGACG
CGGTCATGGA ACAAGGATGC GTTGATCCAG CCGAGCAGCC GCGCGGCCTT CAAGGCGCTG
CTCGACCAGG GTTGGTGCGA CGCGATCCGC ACCCTGCATC CGGACCAGCC GATGTTCACC
TTTTGGGACT ACAAGCGCAA CCGCTGGCCG CGCGATGCGG GGCTCAGGCT CGATCACCTG
CTGCTCAGCC CGCAGCTCGC GCCGCGCCTG ACCAAGGCGG GCATCGACCG CGCCATCCGC
GGCGAGGCCG GCGCGAGCGA TCACGCGCCG GCCTGGATCG TGCTGACATA G
 
Protein sequence
MKIATFNINN VRRRLPNLLS WLRSARPDIV CLQELKCAQA EFPADAIATA GYGAVWQGQK 
TWNGVAILAR KAEPVLIRTA LPGAPADKEA RYIEAAVRGI VIGCLYLPNG NPQPGPKFDY
KLAWFKRLHR HAADFIEHDL PVVLAGDYNV APTPLDIYPT RSWNKDALIQ PSSRAAFKAL
LDQGWCDAIR TLHPDQPMFT FWDYKRNRWP RDAGLRLDHL LLSPQLAPRL TKAGIDRAIR
GEAGASDHAP AWIVLT