| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3796 |
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| Symbol | |
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| ID | 5149698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3975142 |
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| End bp | 3976644 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558635 |
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| Product | putative amidase |
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| Protein accession | YP_001239779 |
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| Protein GI | 148255194 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.932507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATTG ACAGACGAAC GCTCATCAAA GGCGCAGGCG CGGCGCTCAC CGCCGCTGCG
GCACTCGGAC CTCACGGCGC CCGCGCCCAG GCCGCCGATC CGCTCTGCTA CGCATCCGTC
CGCGAGCTCA TCGCCATGTT CCGGGCGCGC AAGGCGTCCC CGGTCGATCT CTTGAAGGCC
CAGATCAAGC GGGTCGAGGC CTATAATCCG AAAGTCAACT GCATCACCTA CGAGCATTTC
GATCAGGCGC TCAAGGAAGC CAAGGCCTCC GAAGACCGCT ATCGACGCGG CACCGCAAGG
CCGCTGGACG GGATCACGGT CGCCATCAAG GATGAATTCA GCAGGCCAGG CTGGCGGACG
ACGCAGGGCT CGCTCATCTA CAAGGAATCG CCGCCGGCCA CCGAAAGCTC CGCGATCGCC
GACGCGCTCG AGGCGGCCGG AGCCGTCATG CCGTTCCAGA CGACGGTCCC CGAATTCTAT
CTCTTCCTCG GCGCATCGAC CCGCGCCTGG GGCACGACAC GCAATCCGTG GAATCTCGAA
TACTCCCCGG GCGGATCGTC CGCCGGATCG GGAGCGGCGC TGGCTGCCGG CTTCGCCACG
CTCGCGATGG GCTCCGACAT GGGCGGCTCG ATCCGGATTC CCGCCTCGCA ATGCGGCCTC
TATGGTTTCA AGCCGCCATT CGGGCGCGTC GCAGGTGGCG AAATCCCCTA CTCGACATCC
GGCCCGATGG CGCGGCGCTT CGACGATCTG GTGCGCTTCC AGAACGCGAT CGTTGGCCCG
TCCGACAGGA TCATGGCCGC GATGCGTCCT CGCCTCGATT ATCCCATGCG CTACCCTCGG
ATTGCGGGAT GGCGGATCGC TGTTGACTGG GGCGCCGGCA TCGCCGACGT CATTCCCTCG
GTGAAGGCCG CGATGCTGAA GGGCATCGAC GCGCTGCGCG CCGAGGGCTG CGTCGTGAAC
GAGGTCGACT GCGGGCTCAC CAAGGCGCAC AAATTCGTCT ATATCCGGGG ACTGATGGCG
ACATCGATCG GCACCGCGAT CGAGATCTCG AACGCCCATC GCGATCGGCT CTCGCCCTAT
ATGACCGACC TGCTCGACCA GGTCGGGCCC GTCGGCCCCC GCCAGGCCGA AGAGGCCGAG
GAGTTGCTGG AACGGCTGCA CCGCCAGGTC CAGCAGCGCG TGTTCGACAA AGGCTACAGC
GTGCTGCTGA TGCCGACGAT GGCCACGCCT CTCATCGGCG CCGACATGTT CAAGAGCAAG
GAGAACAACG TCGATCCCTG GGTCGGCACC GGCCTCGGGT TGGCTCTGAC ATGGCACTGG
AATCTGCTCA ACCGCTATCC GGTCCTCGAC GTCCCGCTCG GCGTGGTCGA GCAGCGGATG
CCCTCGGGCA TGCAGGTGAT CGGACAGACC TACACCGATC TCGACGTGTT CCAGTTCGCG
TCGAGCTGGT CTCGCCTGCG ACCGTCGCTG TTCGCCGGCG AGCGCTTCCC GACCTTCACC
TGA
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| Protein sequence | MMIDRRTLIK GAGAALTAAA ALGPHGARAQ AADPLCYASV RELIAMFRAR KASPVDLLKA
QIKRVEAYNP KVNCITYEHF DQALKEAKAS EDRYRRGTAR PLDGITVAIK DEFSRPGWRT
TQGSLIYKES PPATESSAIA DALEAAGAVM PFQTTVPEFY LFLGASTRAW GTTRNPWNLE
YSPGGSSAGS GAALAAGFAT LAMGSDMGGS IRIPASQCGL YGFKPPFGRV AGGEIPYSTS
GPMARRFDDL VRFQNAIVGP SDRIMAAMRP RLDYPMRYPR IAGWRIAVDW GAGIADVIPS
VKAAMLKGID ALRAEGCVVN EVDCGLTKAH KFVYIRGLMA TSIGTAIEIS NAHRDRLSPY
MTDLLDQVGP VGPRQAEEAE ELLERLHRQV QQRVFDKGYS VLLMPTMATP LIGADMFKSK
ENNVDPWVGT GLGLALTWHW NLLNRYPVLD VPLGVVEQRM PSGMQVIGQT YTDLDVFQFA
SSWSRLRPSL FAGERFPTFT
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