Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3779 |
Symbol | |
ID | 5155869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3958055 |
End bp | 3959281 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558618 |
Product | putative ABC transporter, substrate binding protein |
Protein accession | YP_001239762 |
Protein GI | 148255177 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGT CTCATGCGCG GCGGATGGCC GCGTTGCTTG CCGCCACCAC GCTCAGCTTT GCCGGCTCCG CCTTCGCCGA CGACAAGGTC GTCAAGATCG GCGTGCTCAA CGACATGTCG AGCCTCTATG CCGATATCGG CGGTCCCAAC TCGGTGGCCG CGATCAACAT GGCGGTCGAA GATTCCGGCA TGAAGGCAAA AGGCTGGACC ATCGAGGTCA TCAGCGGCGA TCACCAGAAC AAGCCCGACA TCGGCGTCAA CATCGGCCGG CAATGGATCG ACACCCAGAA AGTCGACGTG ATCATGGATA CGCCGAACTC CGGCGTCGCG CTCGCGGTCT CCAATCTGGT CAAGGAAAAG AACTCGATCC TGATCAATTC CGGCGGTGCG AGCGCTGACC TCACCGGCAA GGCCTGCAAC GCCAACACCA TCTCCTACAC CTATGACACC TACATGCTGG CGAACGGCAC CGGCAAGGCG CTGACCAAGG CCGGCGGCGA CAGCTGGTTC TTCCTGACCG CGGACTACGC GTTCGGCCAT GCGCTGGAGC GCGACACTTC GGCGGTCGTC ACCGCCAATG GCGGCAAGGT GCTCGGCTCG GTCAAGCATC CGCTCAACAC CGCCGATTTC TCCTCGTTCC TGCTGCAGGC GCAATCGTCG AAGGCCAAGG TCATCGGCCT CGCCAATGCC GGCGGCGACA CCACCAACGC GATCAAGCAG GCATCGGAAT TCGGCATCGT CCAGGGCGGC CAGAAGCTCG CCGCGCTGCT GTTGTTCGTC AACGACGTCC ATGCGCTCGG ACTCAAGGTG GCGCAGGGCC TGACCTTCAC CGAGTCGTTC TACTGGGATC TGAACGACAA GACTCGCGAA TGGTCCAAGC GCTTCCAGAA GCTGTCCCCC AAGGGCACGA TGCCGTCGAT GACGGTGGCC GGTGTCTATG CCGGCACGCT GCATTACCTG AAGACGCTGG ACGCGCTGGG CGGCAATCCG CACGACGGTG CCAAGGTCGT GGCCAAGATG AAAGAGATCC CGACCGACGA TCCGCTGTTC GGCAAGGGCC CGCTGCGCGC CGACGGCCGC CGCCTGATCC CGGCCTATCT GTTCGAGGTC AAGAAGCCCG AAGAGTCCAA ATATCCGTGG GACTACTACA AGCTGATCGC GACCATCGCG CCGGAGGACG CCGCGAAGCC GCTGGAAGCC AGCGAGTGCC CGCTGGTCAA GAAGTAA
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Protein sequence | MTTSHARRMA ALLAATTLSF AGSAFADDKV VKIGVLNDMS SLYADIGGPN SVAAINMAVE DSGMKAKGWT IEVISGDHQN KPDIGVNIGR QWIDTQKVDV IMDTPNSGVA LAVSNLVKEK NSILINSGGA SADLTGKACN ANTISYTYDT YMLANGTGKA LTKAGGDSWF FLTADYAFGH ALERDTSAVV TANGGKVLGS VKHPLNTADF SSFLLQAQSS KAKVIGLANA GGDTTNAIKQ ASEFGIVQGG QKLAALLLFV NDVHALGLKV AQGLTFTESF YWDLNDKTRE WSKRFQKLSP KGTMPSMTVA GVYAGTLHYL KTLDALGGNP HDGAKVVAKM KEIPTDDPLF GKGPLRADGR RLIPAYLFEV KKPEESKYPW DYYKLIATIA PEDAAKPLEA SECPLVKK
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