Gene BBta_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3734 
Symbol 
ID5154910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3911950 
End bp3912822 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID640558572 
Productputative branched-chain amino acid ABC transporter, permease protein 
Protein accessionYP_001239718 
Protein GI148255133 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT CCCTGATCAT CATGCAGCTG TTCTCCGGCA TCGCCCTTGG GGCGGTGCTG 
GTGATCACGG CGCTCGGCCT GACCATCGTG TTCGGCATGC TGGGCGTGGT CAATTTCGCC
CATGGCGCGC TGTTCATGAT CGGCGCCTAT GCCGGGCTCT ATCTGGCGTC GCTGACCGGC
AGTTTCTGGT GGGGGCTGCT GCTCGCGCCG CTGCTGGTCG GCGCCTTCGG CATGCTGATC
GAGCGCGTCC TGGTCCGGCG CCTCTATGGC CGGTCGGTCG ATGATCCCTT GCTGCTGACC
TTCGGGCTCA GCTACATTCT GGTCGAGGGC GTGCGCATCG TGTTCGGCAG CGACGGCATT
CCGTTTCCGA CGCCGTCGCA ACTGATCGGC GTCGTCGATC TCGGCTTCGG CTTCTTTCCG
AAGTACCGGC TGTTCGTGAT CGCCTTGGTG GCCGTCGTGC TGCTGGCGCT GTGGCTGATG
CTGGAGAAAA CCCGGGTTGG CCTGATCGTG CGGGCCGGCG CCCGCGATCC GCAGATCATG
CGCGTGCTCG GCGTCGACAT CGGCAGGGTC TGGCTCGCGA TCTTCGGCCT CGGCGTCGGC
CTGGCGGCGC TGGGCGGGGT CCTGGCGGGG CCGATGCGCA GCGTCAATCC GGAAATGGGA
ACGCTGGTGC TCGCGGAGGC CTTCGTCGTC ACGGTGATCG GCGGCCTCGG TTCGATCGTC
GGCGCGGTGG TCGCGGGGCT GATGGTCGGC GTCTGCATCA GCATGGTGGC GCTGTTCGCG
CCGGAAATGG CGACCATCGT GATGTTCGCG CTGATGGCGG CGGTGCTGCT GGTCCGGCCG
CAGGGCCTGT TCGGCCTCAA GGGGAGAGCG TGA
 
Protein sequence
MDLSLIIMQL FSGIALGAVL VITALGLTIV FGMLGVVNFA HGALFMIGAY AGLYLASLTG 
SFWWGLLLAP LLVGAFGMLI ERVLVRRLYG RSVDDPLLLT FGLSYILVEG VRIVFGSDGI
PFPTPSQLIG VVDLGFGFFP KYRLFVIALV AVVLLALWLM LEKTRVGLIV RAGARDPQIM
RVLGVDIGRV WLAIFGLGVG LAALGGVLAG PMRSVNPEMG TLVLAEAFVV TVIGGLGSIV
GAVVAGLMVG VCISMVALFA PEMATIVMFA LMAAVLLVRP QGLFGLKGRA