Gene BBta_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3733 
Symbol 
ID5154909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3910692 
End bp3911939 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID640558571 
Productputative branched-chain amino acid ABC transporter, periplasmic-binding protein 
Protein accessionYP_001239717 
Protein GI148255132 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGCT ACAACAGGCC AGGACCAGGC GGCATATCCC GGCGTAACGC GCTGCTGGGA 
GCATCGGCCG GCATTGCCAC GCTGGCGATG CCGCGGCTCG GTCGCGCCGC TGACGAGACC
ATCCGCATCG GCTTTCCGAC GCCGCTGACC GGCCCGTTCG CGGCCGAGGC GCGCGACCAG
GTCAAATGCG CCGAGCTCGC GGTCAAGCTG GTCAACGACA AGGGCGGCAT CGCCGGGCGC
AAGGTCGAGC TGCTGGTGCG CGACGACAAG CTCAATGCGG GCGAGGCGGC GACGCGCACC
CTGGAGCTGA TCGAAAAGGA CAAGGTGCAT GCGGTGGTCG GCGCGCTCTC CAGCGCGGTG
CAGCTCGCGG TCAACGAGGT GACCCGCGCG CGTGGCGTCA TCTACGTGTC GATCAGTCAG
TCCGATACGA TCAACGAGGC CAAGGATTTC AGCAAGTTCA CGTTCCACGA GGCGCTCAAT
CCGCACATGA CGACGGCGGC CGTGGCGCGG CAGACCTTGA AGAAGGGCAT GAAGGTCGCG
CATCTCGTCG CCGACTATGC CTATGGCCAC GAGATGCTGC GCGGCTTCAA GCGGGCGCAG
GCGGCGATCG GGGCCGACAC CGTCGGCGAG ATCCTGCACC CGTTCGGCGC GGCGGACTAT
TCGACCTTCA TGCCGCGGCT GATGTCGCTG CGCCCGGATG TGCTGTGCAT CAGCAATTTC
GGCCGCGACC AGGCCAATGC GATCAAGCAG GCGGTCGATT TCGGCATCAA GCAGCAGATG
AAGATCGTCG TGCCAGTGAT CCTGCACAAC CAGCGTCTCG CGGTCGGGCC CGACGTGTTC
GAGGGCGTGG TCGGCGGCGC CAATTATTAT TGGGGACTCG AGACCCAGAA CAAGACCGCG
GCCGAATTCA ACGCGGCGTT CCGCGCCGCC AATGGCGGTG CCATCCCGAC GGATTACGGC
GCCTATGGCT ATTCGGGTGT CGGCTCGCTG CTGATGGCGA TGCAGGCGGC CGGCGGCACC
GAGACCGACA AGGTCGTCGC GGCGCTGGAG GCCCTGCAAT ATGACCTGAC CAAGGGCCCG
CAGCATTACC GCAAATGCGA CCACCAATCG GTGCAGTCGG TGCTTGTGCT GGAATCGAAG
AAGAAGTCGG CTATGGCCAA TGACAGCGAC CTGTTCGCGA TCGTGGCCAA CGATCCCGGC
GCCGACGAGA TGCTGCGCAG CTGCAGCGAA CTCGGCCACG CGACTTGA
 
Protein sequence
MPSYNRPGPG GISRRNALLG ASAGIATLAM PRLGRAADET IRIGFPTPLT GPFAAEARDQ 
VKCAELAVKL VNDKGGIAGR KVELLVRDDK LNAGEAATRT LELIEKDKVH AVVGALSSAV
QLAVNEVTRA RGVIYVSISQ SDTINEAKDF SKFTFHEALN PHMTTAAVAR QTLKKGMKVA
HLVADYAYGH EMLRGFKRAQ AAIGADTVGE ILHPFGAADY STFMPRLMSL RPDVLCISNF
GRDQANAIKQ AVDFGIKQQM KIVVPVILHN QRLAVGPDVF EGVVGGANYY WGLETQNKTA
AEFNAAFRAA NGGAIPTDYG AYGYSGVGSL LMAMQAAGGT ETDKVVAALE ALQYDLTKGP
QHYRKCDHQS VQSVLVLESK KKSAMANDSD LFAIVANDPG ADEMLRSCSE LGHAT