| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3719 |
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| Symbol | |
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| ID | 5154955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3896665 |
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| End bp | 3899889 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558557 |
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| Product | AcrB/AcrD/AcrF family cation mulitdrug efflux protein |
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| Protein accession | YP_001239703 |
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| Protein GI | 148255118 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTTG GACTCTCAGG CAAGCTGACC CAGGCGACCA TTGCCTCGCC GCTGACACCA
CTGTTCCTGC TCGCCGCGCT CGTGGTCGGC CTCATCGCGG TGGTCGTCAT CCCGCGTGAG
GAAGAGCCGC AGATCAGCGT GCCCATGGTC GACATCCGCG TCAACGCCGA CGGCCTGCGC
GCGCCCGACG GCGTCGAGCT TGTGACCAAG CCGCTGGAGA CGATCGTCAA GGCGATCGAC
GGTGTGGAGC ACGTCTACAG CCAGACCGAG GATGACCGGG TCATGGTGAC CGCGCGGTTC
CTGGTCGGCA CCAAGTTCGA GGACGCCATA CTGCGCGTCC ACGACAAGAT CCGCGCCAAT
CTCGATCGCA TCCCCGTCGG CATCCCCGAG CCGATGATCG TCGGCCGCGG GATCAACGAC
GTCGCTGTCA CGGTGCTGAC CCTGTCACCG AAGCCGGAGG CCGCCGAGCG CTGGTCCGAC
AAGGACCTCT ACGAGCTGGC GGACAAGCTG CGCGCCGAGC TGACCAAGGT CGACAATATC
GGCCTGACCT ACATCTCCGG CGGCGGCGCC CAGCAGATCC GCGTCGAGCC TGATACCGAG
AAGCTGTCGC TGTTCGGCGT GACCTTGCAG CAGCTCGTCG CCAAGGTGAA GGATGCCAAC
CGCTCGTTCC TCGCTGGCGA CGTCCGCGAC GGTGGCATCG TGCGCAACGT CACAGCCGGG
CAGACGCTGA CCGGCATTCC CGATATCGGC CTGCTGCTGA TCTCGACCCG CGACGGCCGC
CCGGTCTATG TGCGTGACGT CGCGACCGTC GTCATCGGCC CCAATCTCGC CGAACATCGG
GTCTGGGACG ACGCGCGCAA TGGCAAGGGC GACTGGCACC GGGTGCCCGC GGTGAGTCTG
GCCCTCGCCA AGCGCGCCGG CGCCAACGCG GTCGTGGTGT CGCACGACAT CGCGCAGCGC
CTCGAAGGAC TCAAGACCAG CCTCATTCCG AGCGATGTCG CCGTCACCGT GACCCGCGAC
TATGGCGAGA CCGCGAACGA GAAAGCCAAC GAGCTCTTGT TCCATCTCGG CCTCGCCACG
ATCTCGATCG TCGTGCTGAT TGCGGTTGCG ATCGGCTGGC GCGAGGCGCT CGTGACATTC
GTGGTGATTC CGACCACGAT CCTGCTGACG ATGTTCGCCG CCAATCTGAT GGGCTACACG
ATCAACCGCG TCAGCCTGTT TGCTCTGATC TTCTCGATCG GCATTCTGGT CGACGACGCC
ATCGTCGTGG TCGAGAACAT CGCCCGCCAC TGGGGCATGG CTGACGGCCG GCCGCGCCTG
CAGGCCACGA TTGAAGCGGT GGCCGAGGTC GGCAATCCCA CGGTCGTCGC CACCCTGACC
GTGGTTGCCG CCCTGCTCCC GATGCTGTTC GTGTCGGGAC TGATGGGCCC CTATATGGCG
CCGATCCCCG CCAACGCATC GGCCGCGATG CTATTCTCGT TCTTCGTCGC CATGGTCGTG
GCCCCGTGGC TGATGCTACG GCTGGCGCCA AAGCAGACCA CGGCCGCGGC CGGCGCGCAT
CACGATGCGC ATGGCGAAGG CCGCCTCGGG CGCATCTACC GCAGCGTCGC GCGCCCGATC
GTCGCCAGCA AGCGCTCCGC CTGGATCTTC CTGCTCGGCG TCGGCATCGC GACGCTGCTC
TCGATGACCT TGTTCGCCAC CAAGTCCGTC ACGGTCAAGC TGCTGCCGTT CGACAACAAG
TCGGAGATCG CCGTGATGGT CGATCTGCCC GAGGGCGCGA GCCTGGAGGA TACCGAGCGG
ACGCTGTTTG CCGCAGCCGA CATCGCGCAC CAGCTGCCGG AGATCACGAC TGTGCAGAGC
TATGCCGGCA CGGCCGCGCC GTTCAACTTC AACGGCCTCG TCCGGCACTA TTATTTGCGC
GAGCGCCCGG AGCTCGGCGA GCTCCAGGTC AATCTCGCAG CGCGCGGCGA TCGCAAGCGG
GCGAGCCATG ACATCGCGCT CGATCTGCGG CAGCGGCTCA AGGCCGTTTC CGTGCCGTCA
GGGACCAGCA TCAAGGTGGT CGAGGTGCCG CCGGGGCCGC CAGTGCTGGC GACGCTGCTT
GCCGAGATCT ACGGCCCGGA TGCCGCGACA AGGCGCGCCG TCACGAGCGA GCTGAAGAAG
GTGTTCGCCG ACGTTCCGTT CATCGTCGAC ATCGACGATT CGATCGGCCA GCGCCGGCCG
CGGCTGCGGC TGTCGATCGA CCAGGACAGT CTGGAATTCT TCGGGGTCGA GCAGCGCGAC
GTCTACGACA CCATCCAGAC CTTGTTCGGC GGCGTCTCGG TCGGCTACTC GCATCGCGGC
GAGGACCGCA ATCCGATCGA GATCGCGGTG CGGCTGCCCA AGCGCGACAA ATCGTGGAGC
GAGGCTTTGG CCTCGACGCC GGTGCCGGCC AACACAGTGC CGGGCAGCAA GACCGTGGTC
GAGCTCGGTC AGGTCGTGAA GGCCACGATG GAAGATGGTT CGCCGATGAT CTTCCGCCGC
GACGGTCGCT TCGCCGATAT GGTGATGGCC GAGCTCGCCG GCCGCTTCGA GGCACCGCTC
TACGGGATGC TCGCGGTCGC CGACCGCATC GACGCCCATG ACTGGGGCAA GCTGCCAAAA
CCGGCGATCG GCTTCCACGG ACAGCCCAAG GACGAGTCCC ATCCGACGCT GCTATGGGAC
GGCGAATGGG AGATCACCTA TGTGACATTC CGCGACATGG GCGCGGCGTT CGGCGCAGCG
ATCCTCGGCA TCTACGTGCT GGTGGTGGCG CAGTTCAAGA GCTTCCGCCT GCCGCTCGTC
ATTCTGACTC CGATTCCACT GACCCTGATC GGCATCCTGC TCGGCCACTG GCTGCTGGGC
GCGCCATTCA CCGCGACATC GATGATCGGC TTCATCGCGC TGGCCGGCAT CATCGTCCGC
AACTCGATTC TGCTCGTCGA CTTCATCCGG CACAGCGGCG GCGAGGGCAA GACGCTGCGC
GACGTCGTGT TGGAAGCCGG CGCAGTGCGC TTCAAGCCGA TCCTGCTCAC GGCGCTGGCC
GCGATGATCG GTGCGGCCAC GATCCTGCTC GACCCGATCT TCCAGGGCCT GGCGATCTCG
CTGCTGTTCG GCCTGGCCTC ATCCACTTTG CTCACCGTGC TCGTGATCCC CGCGATCTAC
ATCGCACTGC GCGAGCCCGG CAAACCCACC ACGAAGATGT CGTAG
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| Protein sequence | MKLGLSGKLT QATIASPLTP LFLLAALVVG LIAVVVIPRE EEPQISVPMV DIRVNADGLR
APDGVELVTK PLETIVKAID GVEHVYSQTE DDRVMVTARF LVGTKFEDAI LRVHDKIRAN
LDRIPVGIPE PMIVGRGIND VAVTVLTLSP KPEAAERWSD KDLYELADKL RAELTKVDNI
GLTYISGGGA QQIRVEPDTE KLSLFGVTLQ QLVAKVKDAN RSFLAGDVRD GGIVRNVTAG
QTLTGIPDIG LLLISTRDGR PVYVRDVATV VIGPNLAEHR VWDDARNGKG DWHRVPAVSL
ALAKRAGANA VVVSHDIAQR LEGLKTSLIP SDVAVTVTRD YGETANEKAN ELLFHLGLAT
ISIVVLIAVA IGWREALVTF VVIPTTILLT MFAANLMGYT INRVSLFALI FSIGILVDDA
IVVVENIARH WGMADGRPRL QATIEAVAEV GNPTVVATLT VVAALLPMLF VSGLMGPYMA
PIPANASAAM LFSFFVAMVV APWLMLRLAP KQTTAAAGAH HDAHGEGRLG RIYRSVARPI
VASKRSAWIF LLGVGIATLL SMTLFATKSV TVKLLPFDNK SEIAVMVDLP EGASLEDTER
TLFAAADIAH QLPEITTVQS YAGTAAPFNF NGLVRHYYLR ERPELGELQV NLAARGDRKR
ASHDIALDLR QRLKAVSVPS GTSIKVVEVP PGPPVLATLL AEIYGPDAAT RRAVTSELKK
VFADVPFIVD IDDSIGQRRP RLRLSIDQDS LEFFGVEQRD VYDTIQTLFG GVSVGYSHRG
EDRNPIEIAV RLPKRDKSWS EALASTPVPA NTVPGSKTVV ELGQVVKATM EDGSPMIFRR
DGRFADMVMA ELAGRFEAPL YGMLAVADRI DAHDWGKLPK PAIGFHGQPK DESHPTLLWD
GEWEITYVTF RDMGAAFGAA ILGIYVLVVA QFKSFRLPLV ILTPIPLTLI GILLGHWLLG
APFTATSMIG FIALAGIIVR NSILLVDFIR HSGGEGKTLR DVVLEAGAVR FKPILLTALA
AMIGAATILL DPIFQGLAIS LLFGLASSTL LTVLVIPAIY IALREPGKPT TKMS
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