Gene BBta_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3718 
Symbol 
ID5154986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3896299 
End bp3896655 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content66% 
IMG OID640558556 
Productputative carboxymuconolactone decarboxylase 
Protein accessionYP_001239702 
Protein GI148255117 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT TGTACAGCGA GATCTGCAAG GACCTGTCCG GCAACTTGAA GACGCTGCGC 
AAGGACATTC CCGACGTGAT GCAGGGCTTC TCCGCATTGG CGCGGGCCGC CGGCGCCGAC
GGCGCGCTCG ACAAGAAGAC CAAGGAGCTG ATTGCGCTTG CCATCGGCGT CGCGGTCCGC
TGCGACGGCT GCATCGGCTT TCACGCCGAG GCGCTGGTCC GTCTCGGCGC AACCCGCCAG
GAGGTCGAGG AGACGCTCGG CATGGCGATC TACATGGGCG GCGGGCCGTC GCTGATGTAT
GCGGCCGACG CCATTGCAGC GTTCGAGCAG TTCCAGCAGC AGACGGCGGC CGCCTGA
 
Protein sequence
MTKLYSEICK DLSGNLKTLR KDIPDVMQGF SALARAAGAD GALDKKTKEL IALAIGVAVR 
CDGCIGFHAE ALVRLGATRQ EVEETLGMAI YMGGGPSLMY AADAIAAFEQ FQQQTAAA