Gene BBta_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3717 
Symbol 
ID5154985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3895068 
End bp3896291 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content65% 
IMG OID640558555 
Productacetylornithine deacetylase 
Protein accessionYP_001239701 
Protein GI148255116 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACACA TGGATCGCAA CGAACTGCTC GCCCGCATCG ACGTCCCCGG GGCGCTCGCG 
CTGCTGTCGC GCATGGTACA GCACAAGAGC TATTCGAAAA CGGAGGGTGA GAAGCAGCTC
GCGACCTTCA TGGCGGAGCG GATGCGCGAA ATCGGCCTGG ACGCCGCCGT GGCTCCGTTC
GGCACCGAAG GCCGGGTCAA TGCCGTCGGA CGCTGGAAGG GCAGCGGGGG TGGGAAGAGC
CTGCTGTTCA ACGGCCATGT CGACACCAAC CCGGTGACCG AAGGCTGGAC CGTCGATCCC
TGGGAAGGGA AGGTCGACGA CAAGTTCATC TACGGCATCG GCGTGTCCAA CATGAAGGCT
GGCGACGCGG CCTATTTCTG CGCGGTCAAG ACGCTGATCG ATGCGGGCGT GAAGCTCAGG
GGCGATGTCA TCCTGACCTA TGTGGTCGGC GAGCTGCAGG GCGGCGTCGG CACCTATTCG
CTGATCGAGC AGGGGCTGCG CGCCGACTAT TTCATCAATT CAGAGCCGAC CGACCTCCAG
GCGATGACCA TGCATGCGGC GGCGTTCATG TTCATCATCG AGCTCGTCGG CAATACGCGG
CATTTGTCCA AGCGCGAGCA GGCGGTCGAT GCCATCATGG CGGCCTGCGA TCTCATTCCG
CGCCTCAATA CCATGACGTT CTCGGGTGCC CGCTCGCCCG CGCATGAGGC GATCAACCGT
GTCCATGTCG GCGTCGTTCA CGGCGCGCTC GGCCGCGAAT TGCACGAGTG GCGGACGCCG
CAGGTGGCGG ATTTCGTCCG CATCAAGGGC TCCGGCCGCT ATGCGCCCGG GCAGACCGAG
CAGGGCGCGC TGGCCGACAT GCGGCGCGAG CTCGATGCGC TCGAGGCGCG GTTTCCCGGC
CTCAAGGCGC ATCTGATGTC GGAGGACCGC GCCGGCGTGC CCACCATGCC GCCCTTCGAG
GTGGCACCGG ACAGCCCGAT CGTGCGCGCG GTCAACGATG CCTATCGTGC CGTGCGCGGC
GTGGCGCAGC CGACGGGGCC GGTCGCACCG AGCTGCTTCT ATGGCACAGA CGCCGGCCAT
CTCTATACTT CCGGCGGGAT GCAGGGCATC GTGTGTGGCC CTGGCGGCCG GTACAATACG
ATGCCGGATG AGCGCGTCGA CATTCCCGAC TATCTCGACA TGATCCGCAT CTACATGCTG
GCCATTCTCG ACATTTGCAG CTGA
 
Protein sequence
MQHMDRNELL ARIDVPGALA LLSRMVQHKS YSKTEGEKQL ATFMAERMRE IGLDAAVAPF 
GTEGRVNAVG RWKGSGGGKS LLFNGHVDTN PVTEGWTVDP WEGKVDDKFI YGIGVSNMKA
GDAAYFCAVK TLIDAGVKLR GDVILTYVVG ELQGGVGTYS LIEQGLRADY FINSEPTDLQ
AMTMHAAAFM FIIELVGNTR HLSKREQAVD AIMAACDLIP RLNTMTFSGA RSPAHEAINR
VHVGVVHGAL GRELHEWRTP QVADFVRIKG SGRYAPGQTE QGALADMRRE LDALEARFPG
LKAHLMSEDR AGVPTMPPFE VAPDSPIVRA VNDAYRAVRG VAQPTGPVAP SCFYGTDAGH
LYTSGGMQGI VCGPGGRYNT MPDERVDIPD YLDMIRIYML AILDICS