Gene BBta_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3716 
Symbol 
ID5154984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3893484 
End bp3895058 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content67% 
IMG OID640558554 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001239700 
Protein GI148255115 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTG CGCTCACGAT CGACAATTAC GGGCTCGACT ATTTGACGGC TTCGGGCGTC 
GTCCCTGTGC TGCGCGACGT ATCGCTCGCC ATCGCGCCGG GCGAGGTGCT CGGCCTCGTC
GGAGAATCCG GCTCCGGCAA GAGTTCGCTG GCCTGGGCCT TGATGCGCCA TCTGCCGGCC
AATGCGCGCG AAATCTCCGG GTCGCTGCAG CTCGGCGATA TCGACCTGCA ATCCCTGACG
GCCAAGCAGC TCACCGCGGT CCGCGGCCGC CGGATCGGCA TGGTGTTCCA GGATCCGTCG
ACGGCGCTCA ACCCGACGCT CACGATCGGT CGCCAGATCA CCGAGGCGCT GATGCGCCAC
CGTGATCTGA ACGCCCGGGA CGCCAAGGCG CTCGCGATCG AGCTGCTCGG ACATGTCGAG
TTGCGCGACC CGGCCGCGGT GCTGCGGCGG TATCCGCACG AGATTTCCGG CGGTGAGAAG
CAGCGTGTGA TCATCGCCAC CGCCTTCGGC TGCCGGCCGG ATGTCATCCT GTTCGATGAG
CCGACCACGG CGCTCGACGT CATCACCGGC GCCCGCATCA TCGATCTGTT CGCGCGTCTG
CGCGCCGAGA CAGGCGTCGC GGCGCTTTAT ATCTCGCACG ATCTGGCGAT GATGACCCGT
GTCGCCGATC GCGTCGCAGT GATCCGCCAC GGCCGCGTCG TCGAGCAGGC CAAGGCATCG
GAGATCTTTT CCAGACCGCA GCACGACTAT ACCAGGTCGC TGATCGCTGC GGTGCCACGG
CCGGAGCGGC GGCTGGTCCA CGACATCCCC GGTACCGATG TGCTGCTTCA GGCCCGCGGC
ATCGAGGTCC AGTATGGCAG GGCCGGTCTG TTCCGCGCCG CGCCGCCGCC GGCGACAAAG
GCCGTCGATA TCGACATCCG CGCCGGAGAG ATCGTCGGCG TTGTCGGGGA GTCCGGCTCG
GGCAAATCCT CGATCGCGCG CGCCCTGACC GGTCTCGCCC GGTTCTCCGG CGCGATCAGT
TTCGACGGCG GCACGTTGCA CGGCGCAGGC GACATGGGCG CCGGCTACCG CCGCGATGTC
CAGATCGTGT TCCAGCATCC GGACTCCTCG CTCAATCCGC GCCATCGCAT TGGTGAGATC
CTGTCGCGCC CGTTGAAGCT GTATGGCGGC GATACCGCTG CCGTGCCGCG GCTCCTGGAG
CAGGTCCGGT TGCCGGCCTC CTATGCCACA CGCTGGCCGC ACCAGCTGTC CGGCGGCGAG
AAACAGCGCG TTGCGATTGC CCGCGCGTTT GCAGCGCGCC CGCGGCTCGT GATCTGCGAC
GAGATCACCG CGCCGCTCGA CGTCTCCGTG CAAGCGCAGA TCATCGATCT GTTGCTGGCG
CTGCGGGCCG AGACCGGCGC GGCCTATCTG TTCATCACCC ACGATCTCAA TCTGATCCGC
CAGATTGCGC ACCGCATCGT CGTGATGCGT CATGGTCAGC TGGTCGACAG CCGCGCCATC
GACGCGTTCG GGACCGATGA CGTTCACCCT TACACCCGCG AACTGATGGC GGCGTCGCCG
GCGCCTGTCG GCTGA
 
Protein sequence
MRAALTIDNY GLDYLTASGV VPVLRDVSLA IAPGEVLGLV GESGSGKSSL AWALMRHLPA 
NAREISGSLQ LGDIDLQSLT AKQLTAVRGR RIGMVFQDPS TALNPTLTIG RQITEALMRH
RDLNARDAKA LAIELLGHVE LRDPAAVLRR YPHEISGGEK QRVIIATAFG CRPDVILFDE
PTTALDVITG ARIIDLFARL RAETGVAALY ISHDLAMMTR VADRVAVIRH GRVVEQAKAS
EIFSRPQHDY TRSLIAAVPR PERRLVHDIP GTDVLLQARG IEVQYGRAGL FRAAPPPATK
AVDIDIRAGE IVGVVGESGS GKSSIARALT GLARFSGAIS FDGGTLHGAG DMGAGYRRDV
QIVFQHPDSS LNPRHRIGEI LSRPLKLYGG DTAAVPRLLE QVRLPASYAT RWPHQLSGGE
KQRVAIARAF AARPRLVICD EITAPLDVSV QAQIIDLLLA LRAETGAAYL FITHDLNLIR
QIAHRIVVMR HGQLVDSRAI DAFGTDDVHP YTRELMAASP APVG