Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3659 |
Symbol | |
ID | 5153485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3823274 |
End bp | 3824386 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640558500 |
Product | putative ABC transporter (permease protein) |
Protein accession | YP_001239646 |
Protein GI | 148255061 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00759514 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATCG TCAACATCGT CCAGCTTGGC ATCAAGGAGC TGCGCAGCCT GCTCCGCGAT CCGATGATGC TCGTGCTCAT CATCTACGCG TTCTCGGTCG CCATCTACAC CGGCTCCAAG TCGATGCCGG AAAACCTGAA CATGGCGACC ATCGCCATCG TCGACGAGGA TCGGTCGCCG GCCTCGTCCC GCATCATCAC GGCATTCAAC CCGCCCTATT TTTCCCTGCC CCGGCTGATC AGCCAGCCGG AGATGGATCG GCGGATGGAC AATGGCATCG ACACCTTCGC TCTCGACATT CCGCCAAACT TCCAGCGCGA CCTGCTGGCG AGGAAATCTC CCGCGCTTCA GCTCAACATT GATGCGACGC GCGTCTCACA GGCGTTTACC GGCGCGGGCT ACATCCAGTC GATCCTCACA AGTGAGGTCA GCGAGTTCCT CAGGCGATAT CGCAGCTCCG CCGCCCTGCA GGTGGATCTG GACCTGCGGG CGCGCTTCAA CCAGGAGCTC AAGCAGGCCT GGTTTGGCGC CATCAACAAC CTGATGTCGA ATATCACGAT GCTCTCGATC GTGTTGACCG GAGCCGCGCT GATTCGGGAG CGCGAGCACG GTACGATCGA GCACCTGCTC GTGATGCCGG TGACGCCGTC CGAGATCATG CTCGCCAAGA TCTGGTCGAT GGGGCTCGTG GTGCTGGCGG CGTCCACTTT CGCGCTGGGC GTCGTCATCC ACGGGCTGCT CGCCGTCCCG ATTGAAGGCT CGTGGCTGTT GTTCCTGGCC GGAACGGCCC TCTACCTGTT CGCCACGACC AGCCTCGGCA TCTTCCTTGC CACCCAGGCC GGCACGATGC CGCAATTTGG TCTGCTGCTG ATGCTCGTGC TGCTGCCGCT GCAGCTGCTC TCCGGAACCA TGACCCCGCG GGAGAGTATG CCCGAGCTGA TCCGGGACAT CATGCTGGCC GCGCCAAATA CGCATTTCGT CATGATGGCG CAGTCGATCC TGTTCCGCGG AGCCGGCTTC GACGTCGTTT GGAGGCAGTT CGCGTCCTTG TTCGTGATCG GCACGATCCT CTTCGCCTTC TCGCTGCGCA AGTTCAGAGG GTTTCTGAAG TAG
|
Protein sequence | MQIVNIVQLG IKELRSLLRD PMMLVLIIYA FSVAIYTGSK SMPENLNMAT IAIVDEDRSP ASSRIITAFN PPYFSLPRLI SQPEMDRRMD NGIDTFALDI PPNFQRDLLA RKSPALQLNI DATRVSQAFT GAGYIQSILT SEVSEFLRRY RSSAALQVDL DLRARFNQEL KQAWFGAINN LMSNITMLSI VLTGAALIRE REHGTIEHLL VMPVTPSEIM LAKIWSMGLV VLAASTFALG VVIHGLLAVP IEGSWLLFLA GTALYLFATT SLGIFLATQA GTMPQFGLLL MLVLLPLQLL SGTMTPRESM PELIRDIMLA APNTHFVMMA QSILFRGAGF DVVWRQFASL FVIGTILFAF SLRKFRGFLK
|
| |